Cow genome map
| Conread name: | Lng1-LNG010014A07 |
| Conread position: | 1-133 |
| Cow position: | chr23:2316751-2316611 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-144 |
| Cow position: | chr23:15710120-15710271 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-146 |
| Cow position: | chr23:7175571-7175426 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-146 |
| Cow position: | chr23:9734367-9734220 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 1-146 |
| Cow position: | chr23:25378607-25378460 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 69 |
| Conread position: | 1-148 |
| Cow position: | chr23:4579087-4579231 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 135, 64 |
| Conread position: | 1-148 |
| Cow position: | chr23:4810706-4810554 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-148 |
| Cow position: | chr23:10554056-10554208 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-148 |
| Cow position: | chr23:16631222-16631068 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-148 |
| Cow position: | chr23:16700086-16700235 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 133 |
| Conread position: | 1-148 |
| Cow position: | chr23:18367652-18367499 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 1-148 |
| Cow position: | chr23:22804678-22804527 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 1-148 |
| Cow position: | chr23:33601575-33601720 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 1-148 |
| Cow position: | chr23:33711714-33711570 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 1-148 |
| Cow position: | chr23:36725960-36726112 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-150 |
| Cow position: | chr23:809120-808968 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 134 |
| Conread position: | 1-170 |
| Cow position: | chr23:18296761-18296592 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 2-122 |
| Cow position: | chr23:33934492-33934613 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 2-151 |
| Cow position: | chr23:1337349-1337504 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 68 |
| Conread position: | 5-148 |
| Cow position: | chr23:7596383-7596528 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 5-148 |
| Cow position: | chr23:30656226-30656371 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 5-148 |
| Cow position: | chr23:31601503-31601654 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 5-149 |
| Cow position: | chr23:36309369-36309228 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 7-116 |
| Cow position: | chr23:23113978-23113865 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-118 |
| Cow position: | chr23:6592753-6592869 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-154 |
| Cow position: | chr23:33940209-33940358 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 9-148 |
| Cow position: | chr23:534172-534033 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-147 |
| Cow position: | chr23:12290223-12290087 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 95, 125 |
| Conread position: | 14-148 |
| Cow position: | chr23:11081015-11080885 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 17-146 |
| Cow position: | chr23:22496630-22496761 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 17-148 |
| Cow position: | chr23:18802335-18802469 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 17-156 |
| Cow position: | chr23:19227619-19227478 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 20-150 |
| Cow position: | chr23:29242884-29242748 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 20-151 |
| Cow position: | chr23:21336553-21336688 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 22-148 |
| Cow position: | chr23:14895869-14896000 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 24-148 |
| Cow position: | chr23:30662699-30662824 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 24-148 |
| Cow position: | chr23:39775658-39775534 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 25-148 |
| Cow position: | chr23:12896674-12896797 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-146 |
| Cow position: | chr23:19979020-19979141 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 34-148 |
| Cow position: | chr23:40502592-40502709 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 96 |
| Conread position: | 110-827 |
| Cow position: | chr23:1338255-1337577 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 133-815 |
| Cow position: | chr23:6593671-6592977 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 135-702 |
| Cow position: | chr23:16999694-17000254 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 219 |
| Conread position: | 137-825 |
| Cow position: | chr23:11128279-11128967 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 103 |
| Conread position: | 138-817 |
| Cow position: | chr23:19493108-19493792 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 231 |
| Conread position: | 138-826 |
| Cow position: | chr23:1535382-1536058 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 184 |
| Conread position: | 141-825 |
| Cow position: | chr23:29447987-29447306 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 208 |
| Conread position: | 145-665 |
| Cow position: | chr23:34347141-34347673 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 89 |
| Conread position: | 146-825 |
| Cow position: | chr23:10937034-10936349 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 202 |
| Conread position: | 147-825 |
| Cow position: | chr23:29472040-29471380 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 203 |
| Conread position: | 148-676 |
| Cow position: | chr23:28221971-28222494 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 204 |
| Conread position: | 150-594 |
| Cow position: | chr23:1311298-1310861 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 206 |
| Conread position: | 169-805 |
| Cow position: | chr23:14267589-14268215 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 213-796 |
| Cow position: | chr23:1545089-1545640 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 30 |
| Conread position: | 263-797 |
| Cow position: | chr23:6441672-6441168 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 37 |
| Conread position: | 290-827 |
| Cow position: | chr23:10554810-10554274 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 48 |
| Conread position: | 340-566 |
| Cow position: | chr23:24487058-24486839 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 67, 20 |
| Conread position: | 348-757 |
| Cow position: | chr23:11017656-11017244 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 130, 75 |
| Conread position: | 384-820 |
| Cow position: | chr23:23949289-23949728 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 39 |
Show alignments to all cow chromosomes.