Cow genome map
| Conread name: | Lng1-LNG010014A07 |
| Conread position: | 1-125 |
| Cow position: | chr25:14931811-14931940 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-140 |
| Cow position: | chr25:13569222-13569359 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 1-141 |
| Cow position: | chr25:5514959-5514813 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 1-141 |
| Cow position: | chr25:35110177-35110323 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 1-144 |
| Cow position: | chr25:25861409-25861556 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-146 |
| Cow position: | chr25:17566536-17566389 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 110 |
| Conread position: | 1-147 |
| Cow position: | chr25:15286593-15286739 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 105, 95 |
| Conread position: | 1-148 |
| Cow position: | chr25:6424639-6424788 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 108, 65 |
| Conread position: | 1-148 |
| Cow position: | chr25:6464083-6464229 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 1-148 |
| Cow position: | chr25:12260946-12261097 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-148 |
| Cow position: | chr25:12293799-12293951 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 1-148 |
| Cow position: | chr25:14791702-14791552 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-148 |
| Cow position: | chr25:16001576-16001720 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 58, 99 |
| Conread position: | 1-148 |
| Cow position: | chr25:18075622-18075468 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 1-148 |
| Cow position: | chr25:28187998-28188149 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 1-148 |
| Cow position: | chr25:30319495-30319649 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-149 |
| Cow position: | chr25:20133364-20133516 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-150 |
| Cow position: | chr25:1838186-1838037 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 1-166 |
| Cow position: | chr25:12824071-12824231 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 5-141 |
| Cow position: | chr25:12755546-12755684 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 66 |
| Conread position: | 6-148 |
| Cow position: | chr25:21245660-21245807 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 7-137 |
| Cow position: | chr25:18905828-18905692 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 7-146 |
| Cow position: | chr25:1735371-1735514 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 14-125 |
| Cow position: | chr25:16555697-16555581 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 20-141 |
| Cow position: | chr25:6474167-6474292 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 20-148 |
| Cow position: | chr25:35625248-35625376 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 21-148 |
| Cow position: | chr25:21289275-21289140 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 24-141 |
| Cow position: | chr25:6803477-6803361 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 34-148 |
| Cow position: | chr25:10138012-10137898 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 34-148 |
| Cow position: | chr25:10657109-10657224 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 107-812 |
| Cow position: | chr25:23393895-23394581 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 110-669 |
| Cow position: | chr25:17585997-17585438 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 133-825 |
| Cow position: | chr25:16922745-16922061 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 95 |
| Conread position: | 137-532 |
| Cow position: | chr25:26755333-26755724 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 219 |
| Conread position: | 137-812 |
| Cow position: | chr25:11665720-11666385 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 70 |
| Conread position: | 137-827 |
| Cow position: | chr25:24228288-24227607 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 138-827 |
| Cow position: | chr25:12082298-12081620 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 141-824 |
| Cow position: | chr25:26914285-26914960 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 86 |
| Conread position: | 150-593 |
| Cow position: | chr25:20613604-20614037 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 29 |
| Conread position: | 156-825 |
| Cow position: | chr25:18486528-18487207 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 161-824 |
| Cow position: | chr25:35626162-35625504 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 200 |
| Conread position: | 165-824 |
| Cow position: | chr25:20495623-20496269 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 166-466 |
| Cow position: | chr25:23913748-23914038 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 166-531 |
| Cow position: | chr25:2516080-2516440 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 84 |
| Conread position: | 171-799 |
| Cow position: | chr25:11929475-11928854 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 196-590 |
| Cow position: | chr25:18129315-18129692 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 16, 59 |
| Conread position: | 206-827 |
| Cow position: | chr25:15024285-15024898 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 94 |
| Conread position: | 218-825 |
| Cow position: | chr25:36127775-36127168 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 236-425 |
| Cow position: | chr25:24776505-24776689 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 263-693 |
| Cow position: | chr25:22711468-22711887 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 5 |
| Conread position: | 263-778 |
| Cow position: | chr25:22760072-22760578 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 74 |
| Conread position: | 264-820 |
| Cow position: | chr25:32607332-32606789 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 73 |
| Conread position: | 265-682 |
| Cow position: | chr25:2369803-2370225 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 290 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 268-838 |
| Cow position: | chr25:25705473-25706031 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 377 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 115, 68 |
| Conread position: | 344-606 |
| Cow position: | chr25:18237066-18237326 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 40, 83 |
| Conread position: | 350-525 |
| Cow position: | chr25:28188968-28188797 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 57, 73 |
| Conread position: | 350-825 |
| Cow position: | chr25:23601685-23601207 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 356-825 |
| Cow position: | chr25:15617962-15618432 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 365-765 |
| Cow position: | chr25:26931829-26932227 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 387-677 |
| Cow position: | chr25:10288407-10288104 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 20, 9 |
Show alignments to all cow chromosomes.