Cow genome map


           Conread name:
           Lng1-LNG010014A07
        

               Conread position:
               1-121
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-137
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 79
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               48, 67
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               58, 90
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               48, 62
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               2-151
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               6-138
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               7-147
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               7-150
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               7-151
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               14-149
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               17-148
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               27-148
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               110-427
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               110-464
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 15
               

               Conread position:
               110-500
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               110-824
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 16
               

               Conread position:
               136-486
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 43
               

               Conread position:
               137-474
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 219
               

               Conread position:
               137-823
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 79
               

               Conread position:
               141-825
               

               Cow position:
               
               

               Alignm length:
               702
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 201
               

               Conread position:
               142-584
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 178
               

               Conread position:
               143-544
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               145-535
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               157-827
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               158-751
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 96
               

               Conread position:
               160-674
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 131
               

               Conread position:
               165-570
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               170-493
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               170-824
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 64
               

               Conread position:
               190-827
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 162
               

               Conread position:
               226-797
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               227-825
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               229-531
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 134
               

               Conread position:
               263-466
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 89
               

               Conread position:
               263-821
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               263-825
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               273-825
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 65
               

               Conread position:
               285-668
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 62
               

               Conread position:
               299-830
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 48
               

               Conread position:
               350-825
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               353-537
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 74
               

               Conread position:
               380-827
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               315
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               27, 44
               
Show alignments to all cow chromosomes.