Cow genome map
| Conread name: | Lng1-LNG010014A07 |
| Conread position: | 1-121 |
| Cow position: | chr27:4011683-4011806 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 1-126 |
| Cow position: | chr27:2592554-2592679 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 1-137 |
| Cow position: | chr27:27040611-27040751 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-145 |
| Cow position: | chr27:9090797-9090650 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 1-146 |
| Cow position: | chr27:28921891-28921744 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 1-146 |
| Cow position: | chr27:29283403-29283256 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 1-148 |
| Cow position: | chr27:6550463-6550605 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 58, 90 |
| Conread position: | 1-148 |
| Cow position: | chr27:11815752-11815605 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-148 |
| Cow position: | chr27:13638988-13638838 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-148 |
| Cow position: | chr27:15643177-15643330 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 69 |
| Conread position: | 1-148 |
| Cow position: | chr27:23890945-23891092 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 1-148 |
| Cow position: | chr27:28931788-28931633 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-150 |
| Cow position: | chr27:21569837-21569687 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 1-150 |
| Cow position: | chr27:30868734-30868582 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 59 |
| Conread position: | 1-151 |
| Cow position: | chr27:26413247-26413098 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 1-151 |
| Cow position: | chr27:30765042-30765189 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 1-152 |
| Cow position: | chr27:26428127-26427970 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 2-151 |
| Cow position: | chr27:27550735-27550590 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-148 |
| Cow position: | chr27:22771760-22771912 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 6-138 |
| Cow position: | chr27:29399826-29399959 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 53, 93 |
| Conread position: | 7-147 |
| Cow position: | chr27:7731239-7731095 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-148 |
| Cow position: | chr27:6500070-6500219 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 7-148 |
| Cow position: | chr27:14902640-14902494 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 63 |
| Conread position: | 7-148 |
| Cow position: | chr27:20591993-20592138 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-148 |
| Cow position: | chr27:23632608-23632756 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 7-148 |
| Cow position: | chr27:30670754-30670892 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 7-150 |
| Cow position: | chr27:23554318-23554163 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-151 |
| Cow position: | chr27:2930587-2930439 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 14-148 |
| Cow position: | chr27:21385422-21385291 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 14-149 |
| Cow position: | chr27:22735582-22735446 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 17-148 |
| Cow position: | chr27:13841396-13841531 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 27-148 |
| Cow position: | chr27:27270510-27270383 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 110-427 |
| Cow position: | chr27:9970407-9970721 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 110-464 |
| Cow position: | chr27:13316795-13317136 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 110-500 |
| Cow position: | chr27:5983794-5983413 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 110-824 |
| Cow position: | chr27:27729251-27728547 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 136-486 |
| Cow position: | chr27:27930465-27930805 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 43 |
| Conread position: | 137-474 |
| Cow position: | chr27:2681780-2682113 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 219 |
| Conread position: | 137-823 |
| Cow position: | chr27:11434435-11435106 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 79 |
| Conread position: | 141-825 |
| Cow position: | chr27:11256422-11255736 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 201 |
| Conread position: | 142-584 |
| Cow position: | chr27:1081897-1081474 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 178 |
| Conread position: | 143-544 |
| Cow position: | chr27:11489887-11490283 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 99 |
| Conread position: | 145-535 |
| Cow position: | chr27:30036137-30036532 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 208 |
| Conread position: | 157-827 |
| Cow position: | chr27:16427940-16428612 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 43 |
| Conread position: | 158-751 |
| Cow position: | chr27:17565353-17564807 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 96 |
| Conread position: | 160-674 |
| Cow position: | chr27:4828782-4829299 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 131 |
| Conread position: | 165-570 |
| Cow position: | chr27:16581870-16581488 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 170-493 |
| Cow position: | chr27:15405913-15406230 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 170-824 |
| Cow position: | chr27:26654164-26653529 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 190-827 |
| Cow position: | chr27:13409307-13409947 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 162 |
| Conread position: | 226-797 |
| Cow position: | chr27:26034174-26033604 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 227-825 |
| Cow position: | chr27:23454331-23454927 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 229-531 |
| Cow position: | chr27:17864336-17864627 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 134 |
| Conread position: | 263-466 |
| Cow position: | chr27:27017208-27017399 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 89 |
| Conread position: | 263-821 |
| Cow position: | chr27:30476858-30476287 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 263-825 |
| Cow position: | chr27:16823578-16823037 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 26 |
| Conread position: | 273-825 |
| Cow position: | chr27:12147292-12147840 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 65 |
| Conread position: | 285-668 |
| Cow position: | chr27:28145717-28146076 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 62 |
| Conread position: | 299-830 |
| Cow position: | chr27:16551204-16550674 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 350-825 |
| Cow position: | chr27:28081600-28082093 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 353-537 |
| Cow position: | chr27:18970203-18970383 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 28, 74 |
| Conread position: | 380-827 |
| Cow position: | chr27:28134405-28134869 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 27, 44 |
Show alignments to all cow chromosomes.