Cow genome map


           Conread name:
           Lng1-LNG010014A07
        

               Conread position:
               1-126
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 92
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-141
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 108
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               45, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 97
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               2-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 80
               

               Conread position:
               5-137
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               5-145
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               43, 65
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               6-148
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               6-151
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               7-141
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               7-146
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               7-146
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               7-150
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               47, 85
               

               Conread position:
               8-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               14-129
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               14-148
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               14-151
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               19-146
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               20-141
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               27, 119
               

               Conread position:
               25-148
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               27-146
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               110-469
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               110-825
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               110-825
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               564
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               132-827
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               133-827
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 241
               

               Conread position:
               136-816
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 228
               

               Conread position:
               137-706
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               137-815
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 202
               

               Conread position:
               137-822
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 96
               

               Conread position:
               137-825
               

               Cow position:
               
               

               Alignm length:
               701
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 195
               

               Conread position:
               137-827
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 216
               

               Conread position:
               138-595
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 221
               

               Conread position:
               138-787
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 55
               

               Conread position:
               138-825
               

               Cow position:
               
               

               Alignm length:
               704
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 16
               

               Conread position:
               145-531
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               146-466
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 207
               

               Conread position:
               146-773
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 196
               

               Conread position:
               159-461
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 175
               

               Conread position:
               159-815
               

               Cow position:
               
               

               Alignm length:
               670
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               160-662
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 192
               

               Conread position:
               166-820
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 175
               

               Conread position:
               166-827
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               171-827
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 118
               

               Conread position:
               173-580
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 177
               

               Conread position:
               174-778
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               181-825
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 159
               

               Conread position:
               183-667
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 99
               

               Conread position:
               193-482
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 150
               

               Conread position:
               214-827
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 35
               

               Conread position:
               216-531
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 134
               

               Conread position:
               217-465
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 139
               

               Conread position:
               226-823
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 121
               

               Conread position:
               240-796
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 99
               

               Conread position:
               266-823
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 166
               

               Conread position:
               287-712
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 42
               

               Conread position:
               295-725
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 9
               

               Conread position:
               297-825
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 114
               

               Conread position:
               298-600
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               322-535
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               327-747
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               341-693
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               343-825
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               344-825
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               349-800
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               380-825
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 38
               
Show alignments to all cow chromosomes.