Cow genome map


           Conread name:
           Lng1-LNG010014A07
        

               Conread position:
               1-133
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               1-135
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               83, 66
               

               Conread position:
               1-146
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 70
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               47, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 96
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               9-148
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               14-130
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               14-150
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-146
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               31, 90
               

               Conread position:
               17-148
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               20-189
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               117-825
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 123
               

               Conread position:
               137-669
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               137-672
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 207
               

               Conread position:
               137-799
               

               Cow position:
               
               

               Alignm length:
               682
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               138-701
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 47
               

               Conread position:
               144-799
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 195
               

               Conread position:
               145-382
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               71, 186
               

               Conread position:
               146-825
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 196
               

               Conread position:
               146-825
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               548
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 205
               

               Conread position:
               147-505
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               148-815
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 221
               

               Conread position:
               150-466
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 191
               

               Conread position:
               155-785
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               159-519
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               160-816
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 272
               

               Conread position:
               164-825
               

               Cow position:
               
               

               Alignm length:
               676
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 17
               

               Conread position:
               166-792
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 66
               

               Conread position:
               170-802
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 186
               

               Conread position:
               171-466
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               193-423
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 23
               

               Conread position:
               211-466
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               170, 63
               

               Conread position:
               219-578
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               224-824
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 126
               

               Conread position:
               263-823
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 170
               

               Conread position:
               281-565
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 66
               

               Conread position:
               292-628
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 55
               

               Conread position:
               304-825
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               344-827
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 80
               

               Conread position:
               348-826
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 51
               

               Conread position:
               366-827
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 58
               
Show alignments to all cow chromosomes.