Cow genome map
Conread name: | Lng1-LNG010014A07 |
Conread position: | 1-133 |
Cow position: | chr29:19389436-19389300 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 103 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 1-135 |
Cow position: | chr29:24345502-24345640 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 43, 13 |
Conread position: | 1-146 |
Cow position: | chr29:707002-707143 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 83, 66 |
Conread position: | 1-146 |
Cow position: | chr29:15738393-15738542 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 1-148 |
Cow position: | chr29:2744323-2744471 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 47, 68 |
Conread position: | 1-148 |
Cow position: | chr29:3100308-3100461 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 123 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 46, 70 |
Conread position: | 1-148 |
Cow position: | chr29:4066035-4065887 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 43, 68 |
Conread position: | 1-148 |
Cow position: | chr29:4520284-4520136 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 125 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 47, 68 |
Conread position: | 1-148 |
Cow position: | chr29:18735692-18735842 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 1-148 |
Cow position: | chr29:19253871-19254022 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-148 |
Cow position: | chr29:22175636-22175491 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 43, 68 |
Conread position: | 1-148 |
Cow position: | chr29:22778228-22778381 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 122 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 47, 69 |
Conread position: | 1-148 |
Cow position: | chr29:23697928-23697779 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 120 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 42, 94 |
Conread position: | 1-148 |
Cow position: | chr29:36586527-36586379 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 7-148 |
Cow position: | chr29:3711333-3711187 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 42, 96 |
Conread position: | 7-148 |
Cow position: | chr29:24952631-24952485 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 9-148 |
Cow position: | chr29:1933613-1933756 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 14-130 |
Cow position: | chr29:3502503-3502388 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 14-150 |
Cow position: | chr29:26270002-26269866 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 110 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 17-146 |
Cow position: | chr29:699683-699813 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 31, 90 |
Conread position: | 17-148 |
Cow position: | chr29:465465-465600 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 20-189 |
Cow position: | chr29:4334658-4334484 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 133 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 28, 50 |
Conread position: | 117-825 |
Cow position: | chr29:4518991-4519699 (view UCSC Genome Browser custom track) |
Alignm length: | 725 |
Alignm identity: | 512 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 123 |
Conread position: | 137-669 |
Cow position: | chr29:32913839-32913313 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 17 |
Conread position: | 137-672 |
Cow position: | chr29:9939521-9938996 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 207 |
Conread position: | 137-799 |
Cow position: | chr29:7723948-7724606 (view UCSC Genome Browser custom track) |
Alignm length: | 682 |
Alignm identity: | 510 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 40 |
Conread position: | 138-701 |
Cow position: | chr29:27814070-27814612 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 47 |
Conread position: | 144-799 |
Cow position: | chr29:18365339-18364705 (view UCSC Genome Browser custom track) |
Alignm length: | 668 |
Alignm identity: | 489 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 195 |
Conread position: | 145-382 |
Cow position: | chr29:27259599-27259364 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 188 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 71, 186 |
Conread position: | 146-825 |
Cow position: | chr29:7847678-7848355 (view UCSC Genome Browser custom track) |
Alignm length: | 694 |
Alignm identity: | 535 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 196 |
Conread position: | 146-825 |
Cow position: | chr29:35076410-35077095 (view UCSC Genome Browser custom track) |
Alignm length: | 695 |
Alignm identity: | 548 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 205 |
Conread position: | 147-505 |
Cow position: | chr29:27630641-27630303 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 57 |
Conread position: | 148-815 |
Cow position: | chr29:8623920-8623281 (view UCSC Genome Browser custom track) |
Alignm length: | 677 |
Alignm identity: | 490 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 221 |
Conread position: | 150-466 |
Cow position: | chr29:960491-960798 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 191 |
Conread position: | 155-785 |
Cow position: | chr29:7604698-7605321 (view UCSC Genome Browser custom track) |
Alignm length: | 651 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 83 |
Conread position: | 159-519 |
Cow position: | chr29:40095831-40096181 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 20 |
Conread position: | 160-816 |
Cow position: | chr29:29701909-29701256 (view UCSC Genome Browser custom track) |
Alignm length: | 678 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 272 |
Conread position: | 164-825 |
Cow position: | chr29:4481083-4480442 (view UCSC Genome Browser custom track) |
Alignm length: | 676 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 17 |
Conread position: | 166-792 |
Cow position: | chr29:16052051-16051428 (view UCSC Genome Browser custom track) |
Alignm length: | 655 |
Alignm identity: | 435 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 66 |
Conread position: | 170-802 |
Cow position: | chr29:18879604-18878962 (view UCSC Genome Browser custom track) |
Alignm length: | 654 |
Alignm identity: | 498 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 186 |
Conread position: | 171-466 |
Cow position: | chr29:17794314-17794603 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 21 |
Conread position: | 193-423 |
Cow position: | chr29:32286599-32286823 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 176 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 69, 23 |
Conread position: | 211-466 |
Cow position: | chr29:15694091-15693852 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 190 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 170, 63 |
Conread position: | 219-578 |
Cow position: | chr29:290475-290127 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 251 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 47, 131 |
Conread position: | 224-824 |
Cow position: | chr29:22935412-22936012 (view UCSC Genome Browser custom track) |
Alignm length: | 623 |
Alignm identity: | 467 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 126 |
Conread position: | 263-823 |
Cow position: | chr29:13553301-13553875 (view UCSC Genome Browser custom track) |
Alignm length: | 583 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 170 |
Conread position: | 281-565 |
Cow position: | chr29:35291088-35291356 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 66 |
Conread position: | 292-628 |
Cow position: | chr29:19946749-19946416 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 55 |
Conread position: | 304-825 |
Cow position: | chr29:24728851-24728336 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 24 |
Conread position: | 344-827 |
Cow position: | chr29:12875646-12876137 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 80 |
Conread position: | 348-826 |
Cow position: | chr29:9911387-9911895 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 51 |
Conread position: | 366-827 |
Cow position: | chr29:254327-254793 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 58 |
Show alignments to all cow chromosomes.