Cow genome map
| Conread name: | Lng1-LNG010014A07 |
| Conread position: | 1-110 |
| Cow position: | chr3:26981993-26981881 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 1-117 |
| Cow position: | chr3:34669800-34669918 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 64 |
| Conread position: | 1-117 |
| Cow position: | chr3:61361333-61361213 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-129 |
| Cow position: | chr3:27697050-27697185 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 1-134 |
| Cow position: | chr3:13301921-13302059 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 63 |
| Conread position: | 1-140 |
| Cow position: | chr3:4319638-4319497 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 104, 65 |
| Conread position: | 1-141 |
| Cow position: | chr3:74878662-74878804 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 96 |
| Conread position: | 1-146 |
| Cow position: | chr3:38691480-38691625 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 1-146 |
| Cow position: | chr3:65969088-65968935 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-146 |
| Cow position: | chr3:68648092-68647941 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 1-147 |
| Cow position: | chr3:11711888-11711732 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-147 |
| Cow position: | chr3:15859742-15859891 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 108, 58 |
| Conread position: | 1-148 |
| Cow position: | chr3:2506549-2506702 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 62 |
| Conread position: | 1-148 |
| Cow position: | chr3:4457146-4457297 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:5097133-5096983 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 110 |
| Conread position: | 1-148 |
| Cow position: | chr3:8604087-8604235 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:17957392-17957245 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 120 |
| Conread position: | 1-148 |
| Cow position: | chr3:18067062-18066913 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:18855022-18854872 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 1-148 |
| Cow position: | chr3:23270025-23269881 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 116 |
| Conread position: | 1-148 |
| Cow position: | chr3:28898295-28898444 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:29813171-29813022 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 1-148 |
| Cow position: | chr3:31298226-31298381 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:34937770-34937619 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:43528316-43528458 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:53572827-53572971 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:55971153-55971004 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 1-148 |
| Cow position: | chr3:56704617-56704758 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 114 |
| Conread position: | 1-148 |
| Cow position: | chr3:57624391-57624246 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 1-148 |
| Cow position: | chr3:61857430-61857275 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:71430280-71430433 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:72168790-72168942 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 1-148 |
| Cow position: | chr3:74088243-74088395 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:79208071-79208224 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 1-148 |
| Cow position: | chr3:79591955-79592110 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:79902433-79902282 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-148 |
| Cow position: | chr3:82461105-82460963 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 2-132 |
| Cow position: | chr3:55712357-55712220 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 2-148 |
| Cow position: | chr3:27286158-27286004 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 2-148 |
| Cow position: | chr3:42588283-42588128 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 2-148 |
| Cow position: | chr3:52863258-52863406 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 2-148 |
| Cow position: | chr3:65800517-65800372 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 106, 63 |
| Conread position: | 5-148 |
| Cow position: | chr3:8717175-8717024 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-148 |
| Cow position: | chr3:16547599-16547455 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 7-148 |
| Cow position: | chr3:26960669-26960816 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 7-148 |
| Cow position: | chr3:31206796-31206651 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-148 |
| Cow position: | chr3:33252956-33253102 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-148 |
| Cow position: | chr3:68583081-68583224 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 7-148 |
| Cow position: | chr3:79148348-79148497 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-150 |
| Cow position: | chr3:2903377-2903513 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 7-151 |
| Cow position: | chr3:23448217-23448355 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 8-128 |
| Cow position: | chr3:33797083-33797207 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 8-148 |
| Cow position: | chr3:51609741-51609595 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 62 |
| Conread position: | 8-148 |
| Cow position: | chr3:53270749-53270605 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 14-134 |
| Cow position: | chr3:83727334-83727458 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 14-146 |
| Cow position: | chr3:20129859-20129723 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 14-146 |
| Cow position: | chr3:33698643-33698502 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 14-148 |
| Cow position: | chr3:25690706-25690564 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 14-148 |
| Cow position: | chr3:60933328-60933194 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 14-150 |
| Cow position: | chr3:30179995-30179860 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 14-151 |
| Cow position: | chr3:31056085-31056226 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 17-136 |
| Cow position: | chr3:43916307-43916430 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 17-144 |
| Cow position: | chr3:25944995-25944860 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 17-148 |
| Cow position: | chr3:27289848-27289716 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 19-148 |
| Cow position: | chr3:20471454-20471581 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 20-148 |
| Cow position: | chr3:54050112-54050240 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 111 |
| Conread position: | 27-148 |
| Cow position: | chr3:25065137-25065016 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-148 |
| Cow position: | chr3:30463270-30463387 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 32-148 |
| Cow position: | chr3:59392208-59392331 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 120-822 |
| Cow position: | chr3:4030916-4031623 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 210 |
| Conread position: | 126-655 |
| Cow position: | chr3:37486869-37486312 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 124 |
| Conread position: | 130-742 |
| Cow position: | chr3:51235309-51234711 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 130-827 |
| Cow position: | chr3:5420863-5420154 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 178 |
| Conread position: | 133-428 |
| Cow position: | chr3:31810483-31810789 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 159 |
| Conread position: | 133-686 |
| Cow position: | chr3:322681-322123 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 133-704 |
| Cow position: | chr3:84198968-84199521 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 133-735 |
| Cow position: | chr3:31934151-31933560 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 218 |
| Conread position: | 133-820 |
| Cow position: | chr3:70914075-70913379 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 133-822 |
| Cow position: | chr3:42602842-42603532 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 133-827 |
| Cow position: | chr3:49387834-49388530 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 183 |
| Conread position: | 136-519 |
| Cow position: | chr3:16293726-16293348 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 137-423 |
| Cow position: | chr3:38496984-38497277 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 137-518 |
| Cow position: | chr3:33254671-33254297 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 191 |
| Conread position: | 137-552 |
| Cow position: | chr3:35056168-35056563 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 211 |
| Conread position: | 137-825 |
| Cow position: | chr3:24638607-24639300 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 137-825 |
| Cow position: | chr3:61677726-61678401 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 560 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 112 |
| Conread position: | 138-466 |
| Cow position: | chr3:57742703-57743023 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 207 |
| Conread position: | 138-827 |
| Cow position: | chr3:31418725-31419408 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 184 |
| Conread position: | 141-825 |
| Cow position: | chr3:76000767-76000080 (view UCSC Genome Browser custom track) |
| Alignm length: | 710 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 51 |
| Conread position: | 143-550 |
| Cow position: | chr3:4017699-4018110 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 38 |
| Conread position: | 146-514 |
| Cow position: | chr3:5951416-5951063 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 33 |
| Conread position: | 146-703 |
| Cow position: | chr3:48603452-48604008 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 205 |
| Conread position: | 146-825 |
| Cow position: | chr3:78024236-78023569 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 148 |
| Conread position: | 146-827 |
| Cow position: | chr3:23204478-23203792 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 195 |
| Conread position: | 148-825 |
| Cow position: | chr3:35884919-35884243 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 196 |
| Conread position: | 150-544 |
| Cow position: | chr3:59607496-59607876 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 94 |
| Conread position: | 150-700 |
| Cow position: | chr3:40101653-40101118 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 151-827 |
| Cow position: | chr3:18460490-18459808 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 157-815 |
| Cow position: | chr3:24530911-24531538 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 30 |
| Conread position: | 159-466 |
| Cow position: | chr3:35854356-35854057 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 54, 143 |
| Conread position: | 164-417 |
| Cow position: | chr3:71245812-71246073 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 217 |
| Conread position: | 164-423 |
| Cow position: | chr3:77726668-77726908 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 164-816 |
| Cow position: | chr3:19108776-19109439 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 263 |
| Conread position: | 165-825 |
| Cow position: | chr3:17937799-17937141 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 176 |
| Conread position: | 165-825 |
| Cow position: | chr3:18184133-18184778 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 74 |
| Conread position: | 165-825 |
| Cow position: | chr3:23170006-23169360 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 175 |
| Conread position: | 166-488 |
| Cow position: | chr3:19824847-19824533 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 46, 175 |
| Conread position: | 166-824 |
| Cow position: | chr3:26974419-26973758 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 169-824 |
| Cow position: | chr3:80564018-80564667 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 170-784 |
| Cow position: | chr3:55461439-55460829 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 85 |
| Conread position: | 172-517 |
| Cow position: | chr3:40004272-40003944 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 54 |
| Conread position: | 175-426 |
| Cow position: | chr3:60891487-60891743 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 175 |
| Conread position: | 176-815 |
| Cow position: | chr3:16332650-16333280 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 199-825 |
| Cow position: | chr3:72776351-72776950 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 122 |
| Conread position: | 204-463 |
| Cow position: | chr3:11334604-11334353 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 144 |
| Conread position: | 206-455 |
| Cow position: | chr3:73305435-73305676 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 144 |
| Conread position: | 211-380 |
| Cow position: | chr3:32403201-32403365 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 139 |
| Conread position: | 212-544 |
| Cow position: | chr3:36571168-36570839 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 216-610 |
| Cow position: | chr3:67283885-67284272 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 103 |
| Conread position: | 216-825 |
| Cow position: | chr3:45699936-45700544 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 134 |
| Conread position: | 218-605 |
| Cow position: | chr3:39065191-39065562 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 39 |
| Conread position: | 231-825 |
| Cow position: | chr3:43529116-43528527 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 119 |
| Conread position: | 239-416 |
| Cow position: | chr3:76924001-76923818 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 239-532 |
| Cow position: | chr3:82275375-82275088 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 33, 77 |
| Conread position: | 263-815 |
| Cow position: | chr3:77187606-77188149 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 263-822 |
| Cow position: | chr3:38346358-38346910 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 79 |
| Conread position: | 263-824 |
| Cow position: | chr3:47469071-47468521 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 51 |
| Conread position: | 263-825 |
| Cow position: | chr3:8922927-8923473 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 12 |
| Conread position: | 268-482 |
| Cow position: | chr3:21005183-21005388 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 115, 79 |
| Conread position: | 269-605 |
| Cow position: | chr3:52150786-52150458 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 86 |
| Conread position: | 276-669 |
| Cow position: | chr3:78200945-78200557 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 69 |
| Conread position: | 279-823 |
| Cow position: | chr3:51032495-51033053 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 159 |
| Conread position: | 290-826 |
| Cow position: | chr3:49649565-49650091 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 57 |
| Conread position: | 292-778 |
| Cow position: | chr3:70893924-70894397 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 42 |
| Conread position: | 292-826 |
| Cow position: | chr3:6799822-6799291 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 299-644 |
| Cow position: | chr3:18761827-18762161 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 38 |
| Conread position: | 304-823 |
| Cow position: | chr3:6383863-6384376 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 309-655 |
| Cow position: | chr3:24641538-24641868 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 327-491 |
| Cow position: | chr3:35298953-35298797 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 80, 9 |
| Conread position: | 350-532 |
| Cow position: | chr3:62624351-62624173 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 74 |
| Conread position: | 353-825 |
| Cow position: | chr3:14717049-14717524 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 364-832 |
| Cow position: | chr3:67625033-67624562 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 34 |
Show alignments to all cow chromosomes.