Cow genome map
| Conread name: | Lng1-LNG010014A07 | 
| Conread position: | 1-116 | 
| Cow position: | chr6:31814748-31814863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-137 | 
| Cow position: | chr6:9219263-9219126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-140 | 
| Cow position: | chr6:416089-415944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 1-140 | 
| Cow position: | chr6:15242822-15242682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 108, 64 | 
| Conread position: | 1-142 | 
| Cow position: | chr6:48988430-48988283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 1-144 | 
| Cow position: | chr6:57299008-57298866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 58, 119 | 
| Conread position: | 1-145 | 
| Cow position: | chr6:445311-445156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 1-145 | 
| Cow position: | chr6:8804540-8804683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 58, 106 | 
| Conread position: | 1-147 | 
| Cow position: | chr6:53731512-53731364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 47, 69 | 
| Conread position: | 1-147 | 
| Cow position: | chr6:62324983-62324834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:457168-457028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:1770208-1770357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 103, 65 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:2607605-2607455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 45, 67 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:3952508-3952364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:6227008-6226866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 96, 31 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:7190129-7190277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 55, 81 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:9008621-9008769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:10332100-10332254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 42, 85 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:12337979-12337826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:17334063-17334215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:33277033-33276881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 48, 70 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:35471529-35471681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 46, 68 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:38641484-38641340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 48, 92 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:39994471-39994619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 112, 64 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:42565679-42565527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 47, 70 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:46292357-46292496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:46865599-46865751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:53519632-53519781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 7, 65 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:54867504-54867352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 47, 69 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:54884920-54885071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:59620659-59620511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:60783859-60783712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 59, 99 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:61575599-61575445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 53, 69 | 
| Conread position: | 1-148 | 
| Cow position: | chr6:61631618-61631771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 48, 69 | 
| Conread position: | 1-150 | 
| Cow position: | chr6:24327151-24327298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 47, 66 | 
| Conread position: | 1-150 | 
| Cow position: | chr6:50746977-50746820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 1-150 | 
| Cow position: | chr6:57164417-57164267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 60, 129 | 
| Conread position: | 1-151 | 
| Cow position: | chr6:53138931-53139090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 1-151 | 
| Cow position: | chr6:58076219-58076063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 47, 13 | 
| Conread position: | 1-154 | 
| Cow position: | chr6:64449382-64449224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 2-187 | 
| Cow position: | chr6:12542944-12543136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 3-148 | 
| Cow position: | chr6:14201689-14201540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 5-137 | 
| Cow position: | chr6:65903634-65903764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 5-137 | 
| Cow position: | chr6:65904285-65904415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 5-148 | 
| Cow position: | chr6:6460529-6460381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 44, 64 | 
| Conread position: | 7-137 | 
| Cow position: | chr6:54036155-54036282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 7-146 | 
| Cow position: | chr6:20230844-20230982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 42, 85 | 
| Conread position: | 7-148 | 
| Cow position: | chr6:37149172-37149035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 41, 63 | 
| Conread position: | 7-150 | 
| Cow position: | chr6:20605920-20605773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 52, 61 | 
| Conread position: | 7-150 | 
| Cow position: | chr6:61515207-61515358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 7-151 | 
| Cow position: | chr6:55763839-55763693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 37, 64 | 
| Conread position: | 8-141 | 
| Cow position: | chr6:7694365-7694506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 14-137 | 
| Cow position: | chr6:22254007-22254134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 14-141 | 
| Cow position: | chr6:19329778-19329905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 90, 53 | 
| Conread position: | 14-142 | 
| Cow position: | chr6:17345343-17345218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 14-151 | 
| Cow position: | chr6:10605665-10605524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 18-148 | 
| Cow position: | chr6:59015585-59015719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 31, 74 | 
| Conread position: | 19-148 | 
| Cow position: | chr6:33917879-33918009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 90, 46 | 
| Conread position: | 20-133 | 
| Cow position: | chr6:61113728-61113607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 20-146 | 
| Cow position: | chr6:60474109-60473979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 20-148 | 
| Cow position: | chr6:7989438-7989574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 20-148 | 
| Cow position: | chr6:66131277-66131150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 29, 103 | 
| Conread position: | 34-148 | 
| Cow position: | chr6:5958063-5958181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 110-676 | 
| Cow position: | chr6:888768-889325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 16 | 
| Conread position: | 110-765 | 
| Cow position: | chr6:51876972-51877614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 16 | 
| Conread position: | 110-825 | 
| Cow position: | chr6:19718796-19719493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 732 | 
| Alignm identity: | 545 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 16 | 
| Conread position: | 120-827 | 
| Cow position: | chr6:45618375-45617665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 735 | 
| Alignm identity: | 492 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 262 | 
| Conread position: | 133-423 | 
| Cow position: | chr6:17149937-17149657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 150 | 
| Conread position: | 133-580 | 
| Cow position: | chr6:48947427-48946978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 153 | 
| Conread position: | 133-825 | 
| Cow position: | chr6:12388225-12387547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 712 | 
| Alignm identity: | 519 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 27 | 
| Conread position: | 133-826 | 
| Cow position: | chr6:24623910-24623209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 722 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 36 | 
| Conread position: | 135-819 | 
| Cow position: | chr6:6471703-6471006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 554 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 305 | 
| Conread position: | 136-532 | 
| Cow position: | chr6:30316707-30316304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 21 | 
| Conread position: | 137-423 | 
| Cow position: | chr6:38438840-38439131 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 219 | 
| Conread position: | 137-604 | 
| Cow position: | chr6:14897415-14897878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 43 | 
| Conread position: | 137-669 | 
| Cow position: | chr6:33300900-33301431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 213 | 
| Conread position: | 138-660 | 
| Cow position: | chr6:43797666-43797145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 199 | 
| Conread position: | 141-676 | 
| Cow position: | chr6:14851509-14850991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 44 | 
| Conread position: | 145-466 | 
| Cow position: | chr6:11638963-11638650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 48 | 
| Conread position: | 146-814 | 
| Cow position: | chr6:35873485-35872825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 678 | 
| Alignm identity: | 517 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 202 | 
| Conread position: | 146-825 | 
| Cow position: | chr6:14928703-14929367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 691 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 58 | 
| Conread position: | 146-825 | 
| Cow position: | chr6:24242531-24243202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 695 | 
| Alignm identity: | 527 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 205 | 
| Conread position: | 150-825 | 
| Cow position: | chr6:33949911-33949228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 705 | 
| Alignm identity: | 495 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 90 | 
| Conread position: | 151-827 | 
| Cow position: | chr6:46293200-46292554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 692 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 37 | 
| Conread position: | 166-819 | 
| Cow position: | chr6:6163382-6164011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 29 | 
| Conread position: | 168-649 | 
| Cow position: | chr6:35825309-35825780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 128 | 
| Conread position: | 171-606 | 
| Cow position: | chr6:52245770-52246194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 170 | 
| Conread position: | 176-816 | 
| Cow position: | chr6:45065880-45065268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 44 | 
| Conread position: | 179-460 | 
| Cow position: | chr6:68047641-68047371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 123 | 
| Conread position: | 180-613 | 
| Cow position: | chr6:8535516-8535092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 59 | 
| Conread position: | 218-650 | 
| Cow position: | chr6:31880471-31880045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 73 | 
| Conread position: | 225-517 | 
| Cow position: | chr6:18969853-18969581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 7e-34 | 
| Alignm gaps (pig, cow): | 37, 111 | 
| Conread position: | 234-827 | 
| Cow position: | chr6:47977266-47977855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 608 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 116 | 
| Conread position: | 263-605 | 
| Cow position: | chr6:32125310-32125647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 78 | 
| Conread position: | 263-824 | 
| Cow position: | chr6:48568126-48567570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 66 | 
| Conread position: | 307-823 | 
| Cow position: | chr6:39359070-39358568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 526 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 30 | 
| Conread position: | 335-825 | 
| Cow position: | chr6:49411396-49410911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 90 | 
| Conread position: | 353-825 | 
| Cow position: | chr6:17556693-17557148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 70 | 
| Conread position: | 364-827 | 
| Cow position: | chr6:529393-528927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 11 | 
Show alignments to all cow chromosomes.
