Cow genome map


           Conread name:
           Lng1-LNG010014A07
        

               Conread position:
               1-116
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-137
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-140
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               108, 64
               

               Conread position:
               1-142
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-144
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-145
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               58, 106
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-147
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 65
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 67
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               96, 31
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               55, 81
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 85
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 68
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               48, 92
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 64
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               47, 70
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               7, 65
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               59, 99
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               53, 69
               

               Conread position:
               1-148
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-150
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               60, 129
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               1-151
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               2-187
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               3-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               5-137
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-137
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               5-148
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               7-137
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               7-146
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 85
               

               Conread position:
               7-148
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               41, 63
               

               Conread position:
               7-150
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               52, 61
               

               Conread position:
               7-150
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               7-151
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               37, 64
               

               Conread position:
               8-141
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               14-137
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               14-141
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               14-142
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               14-151
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               18-148
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               19-148
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               90, 46
               

               Conread position:
               20-133
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               20-146
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               20-148
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               29, 103
               

               Conread position:
               34-148
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               110-676
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               110-765
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 16
               

               Conread position:
               110-825
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               545
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               120-827
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 262
               

               Conread position:
               133-423
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 150
               

               Conread position:
               133-580
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 153
               

               Conread position:
               133-825
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               133-826
               

               Cow position:
               
               

               Alignm length:
               722
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               135-819
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               554
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 305
               

               Conread position:
               136-532
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               137-423
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 219
               

               Conread position:
               137-604
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               137-669
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 213
               

               Conread position:
               138-660
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 199
               

               Conread position:
               141-676
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 44
               

               Conread position:
               145-466
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               146-814
               

               Cow position:
               
               

               Alignm length:
               678
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 202
               

               Conread position:
               146-825
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 58
               

               Conread position:
               146-825
               

               Cow position:
               
               

               Alignm length:
               695
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 205
               

               Conread position:
               150-825
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 90
               

               Conread position:
               151-827
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 37
               

               Conread position:
               166-819
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               168-649
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 128
               

               Conread position:
               171-606
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 170
               

               Conread position:
               176-816
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 44
               

               Conread position:
               179-460
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 123
               

               Conread position:
               180-613
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 59
               

               Conread position:
               218-650
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               225-517
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               37, 111
               

               Conread position:
               234-827
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               263-605
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               263-824
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 66
               

               Conread position:
               307-823
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 30
               

               Conread position:
               335-825
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 90
               

               Conread position:
               353-825
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 70
               

               Conread position:
               364-827
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 11
               
Show alignments to all cow chromosomes.