Cow genome map

Conread name: Lng1-LNG010014A07

Conread position: 1-141
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 27

Conread position: 1-142
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 69

Conread position: 1-144
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 65

Conread position: 1-144
Cow position:
Alignm length: 144
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-146
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 112

Conread position: 1-148
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 124
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 70

Conread position: 1-148
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 1-148
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 71

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 47, 69

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 67

Conread position: 1-148
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 62

Conread position: 1-148
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 1-148
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 1-150
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 69

Conread position: 1-152
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 62

Conread position: 2-141
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 2-148
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 4-118
Cow position:
Alignm length: 116
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 5-148
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 5-148
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 64

Conread position: 5-148
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 7-146
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 7-148
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 96

Conread position: 7-148
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 92

Conread position: 7-148
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 7-148
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 7-148
Cow position:
Alignm length: 146
Alignm identity: 120
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 7-148
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 64

Conread position: 7-148
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 57

Conread position: 7-148
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 7-148
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 106

Conread position: 7-150
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 42, 62

Conread position: 7-151
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 124

Conread position: 8-148
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 9-148
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 9-148
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 14-148
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 14-150
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 18-148
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 19-148
Cow position:
Alignm length: 134
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 52

Conread position: 20-143
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 33-148
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 9

Conread position: 107-520
Cow position:
Alignm length: 416
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 19

Conread position: 118-546
Cow position:
Alignm length: 440
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 250

Conread position: 130-825
Cow position:
Alignm length: 709
Alignm identity: 550
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 46

Conread position: 133-544
Cow position:
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 43

Conread position: 133-773
Cow position:
Alignm length: 651
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 76

Conread position: 133-825
Cow position:
Alignm length: 721
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 315

Conread position: 134-713
Cow position:
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 104

Conread position: 137-406
Cow position:
Alignm length: 277
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 59

Conread position: 137-411
Cow position:
Alignm length: 283
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 142

Conread position: 137-423
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 75, 204

Conread position: 137-423
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 43

Conread position: 137-463
Cow position:
Alignm length: 341
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 300

Conread position: 137-606
Cow position:
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 20

Conread position: 137-642
Cow position:
Alignm length: 515
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 184

Conread position: 138-825
Cow position:
Alignm length: 707
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 165

Conread position: 141-519
Cow position:
Alignm length: 386
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 28

Conread position: 141-825
Cow position:
Alignm length: 715
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 21

Conread position: 142-427
Cow position:
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 210

Conread position: 145-815
Cow position:
Alignm length: 684
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 59

Conread position: 146-825
Cow position:
Alignm length: 694
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 205

Conread position: 147-543
Cow position:
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 27

Conread position: 147-827
Cow position:
Alignm length: 709
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 150-517
Cow position:
Alignm length: 376
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 150-821
Cow position:
Alignm length: 689
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 92

Conread position: 150-825
Cow position:
Alignm length: 689
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 193

Conread position: 154-665
Cow position:
Alignm length: 519
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 187

Conread position: 165-525
Cow position:
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 79

Conread position: 170-669
Cow position:
Alignm length: 508
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 165

Conread position: 175-791
Cow position:
Alignm length: 635
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 182

Conread position: 182-827
Cow position:
Alignm length: 667
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 133

Conread position: 194-472
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 156

Conread position: 196-612
Cow position:
Alignm length: 422
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 155

Conread position: 200-805
Cow position:
Alignm length: 622
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 207-423
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 63, 36

Conread position: 216-825
Cow position:
Alignm length: 619
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 46

Conread position: 222-536
Cow position:
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 118

Conread position: 226-382
Cow position:
Alignm length: 160
Alignm identity: 128
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 124

Conread position: 228-561
Cow position:
Alignm length: 344
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 26

Conread position: 247-799
Cow position:
Alignm length: 556
Alignm identity: 368
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 17

Conread position: 265-605
Cow position:
Alignm length: 347
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 117, 72

Conread position: 272-595
Cow position:
Alignm length: 329
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 75

Conread position: 284-825
Cow position:
Alignm length: 563
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 146

Conread position: 288-667
Cow position:
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 59

Conread position: 289-519
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 92, 40

Conread position: 298-725
Cow position:
Alignm length: 432
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 49

Conread position: 339-604
Cow position:
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 75

Conread position: 346-822
Cow position:
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 74

Conread position: 349-825
Cow position:
Alignm length: 486
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 78

Conread position: 349-827
Cow position:
Alignm length: 494
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 61

Conread position: 353-541
Cow position:
Alignm length: 195
Alignm identity: 154
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 74

Conread position: 362-723
Cow position:
Alignm length: 365
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 60

Conread position: 365-826
Cow position:
Alignm length: 473
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 370-831
Cow position:
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 377-825
Cow position:
Alignm length: 457
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 46

Show alignments to all cow chromosomes.