Cow genome map

Conread name: Lng1-LNG010018E09

Conread position: 7-364
Cow position: chr12:6105409-6105759 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr12:6530520-6530163 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr12:18116328-18115971 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 235
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr12:22516922-22517278 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 240
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr12:31260507-31260864 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 171, 28

Conread position: 7-370
Cow position: chr12:32146702-32147059 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr12:46111189-46111546 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 221, 25

Conread position: 15-353
Cow position: chr12:1863050-1863382 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-366
Cow position: chr12:29502279-29501934 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-367
Cow position: chr12:3875583-3875929 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 163, 16

Conread position: 15-367
Cow position: chr12:15924833-15925179 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:63133-62784 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:272706-273055 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:379398-379048 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 162, 17

Conread position: 15-370
Cow position: chr12:1007935-1007587 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:4964917-4965266 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 163, 16

Conread position: 15-370
Cow position: chr12:5813391-5813046 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 217, 17

Conread position: 15-370
Cow position: chr12:7873293-7872943 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:8541959-8542308 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:9447309-9447658 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:10442429-10442080 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:12787835-12788184 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:13042320-13042669 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:13166784-13167133 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 213, 16

Conread position: 15-370
Cow position: chr12:13329325-13328976 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 213, 17

Conread position: 15-370
Cow position: chr12:17023799-17023450 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:21666058-21665709 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:25839204-25838855 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:26268296-26268645 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:26333642-26333292 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:27615528-27615179 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:31026900-31027249 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 171, 17

Conread position: 15-370
Cow position: chr12:32900232-32900581 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:33580083-33579736 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:33926813-33926464 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:34366109-34365760 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:34513970-34514319 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:35124393-35124045 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:36485483-36485832 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:37832569-37832220 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 213, 17

Conread position: 15-370
Cow position: chr12:39931085-39930736 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:41185490-41185141 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:41376346-41376695 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:43002738-43003087 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:44758343-44757994 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr12:46124630-46124286 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 213, 17

Conread position: 15-395
Cow position: chr12:1521073-1520699 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 17-363
Cow position: chr12:15259042-15259384 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 8

Conread position: 17-370
Cow position: chr12:21672016-21672363 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 161, 15

Conread position: 17-370
Cow position: chr12:39158624-39158972 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 161, 15

Conread position: 29-361
Cow position: chr12:12877002-12877344 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 222
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 202, 18

Conread position: 31-370
Cow position: chr12:48468710-48468364 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 218
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 133, 23

Conread position: 36-358
Cow position: chr12:22978990-22979310 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 142, 18

Conread position: 36-367
Cow position: chr12:22201777-22202107 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 211
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 199, 18

Conread position: 36-367
Cow position: chr12:27928823-27929152 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 216
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 18

Conread position: 36-370
Cow position: chr12:6403880-6404216 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 18

Conread position: 36-370
Cow position: chr12:8656461-8656129 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 142, 18

Conread position: 36-372
Cow position: chr12:27851751-27852084 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 217
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 185, 18

Conread position: 38-370
Cow position: chr12:3950686-3951014 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 216
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 200, 17

Conread position: 52-370
Cow position: chr12:38894251-38893934 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 176, 55

Conread position: 107-370
Cow position: chr12:14523242-14522974 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 131, 80

Conread position: 111-366
Cow position: chr12:41736909-41737168 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 14

Conread position: 111-367
Cow position: chr12:37843422-37843682 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 121, 14

Conread position: 111-370
Cow position: chr12:464775-465039 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 11

Conread position: 111-370
Cow position: chr12:11102081-11101819 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 14

Conread position: 111-370
Cow position: chr12:32700600-32700336 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 11

Conread position: 111-370
Cow position: chr12:40868167-40867904 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 14

Conread position: 115-367
Cow position: chr12:21250485-21250740 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 63, 10

Conread position: 116-359
Cow position: chr12:24206469-24206218 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 191

Conread position: 116-370
Cow position: chr12:11582983-11582723 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 9

Conread position: 116-370
Cow position: chr12:14424186-14423928 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 62, 7

Conread position: 116-370
Cow position: chr12:29909201-29909461 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 9

Conread position: 116-370
Cow position: chr12:30011143-30011400 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 7

Conread position: 116-370
Cow position: chr12:30016250-30016507 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 7

Conread position: 116-370
Cow position: chr12:32657422-32657164 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 116, 9

Conread position: 116-370
Cow position: chr12:37562830-37562571 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 9

Conread position: 116-370
Cow position: chr12:40270779-40271037 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 22

Conread position: 122-370
Cow position: chr12:1055684-1055938 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr12:30593285-30593537 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 52

Conread position: 122-370
Cow position: chr12:32089055-32088806 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 45

Conread position: 124-374
Cow position: chr12:23137506-23137760 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 42

Conread position: 127-366
Cow position: chr12:37697657-37697901 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 0

Conread position: 134-361
Cow position: chr12:5800592-5800360 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 57

Conread position: 134-361
Cow position: chr12:23937253-23937485 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 27

Conread position: 134-367
Cow position: chr12:1510953-1511191 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 27

Conread position: 134-370
Cow position: chr12:1865095-1865336 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr12:7127376-7127135 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr12:14214873-14214632 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr12:17786829-17787070 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr12:19715791-19716033 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 38

Conread position: 134-370
Cow position: chr12:25265523-25265762 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 152

Conread position: 134-370
Cow position: chr12:27455013-27455254 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr12:32918139-32917898 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr12:35163595-35163354 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr12:43036456-43036697 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 140-370
Cow position: chr12:21433148-21432913 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 38, 26

Conread position: 141-367
Cow position: chr12:36446190-36445959 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 25

Conread position: 171-370
Cow position: chr12:10790469-10790675 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 179-370
Cow position: chr12:10076426-10076229 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 49, 124

Show alignments to all cow chromosomes.