Cow genome map

Conread name: Lng1-LNG010018E09

Conread position: 6-363
Cow position: chr14:19407489-19407132 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 90, 21

Conread position: 7-358
Cow position: chr14:2289837-2289492 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 7-366
Cow position: chr14:12857918-12858270 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 217, 25

Conread position: 7-370
Cow position: chr14:9448953-9449313 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 237
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 179, 25

Conread position: 7-370
Cow position: chr14:14442852-14443209 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr14:19551073-19550716 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr14:21346554-21346910 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr14:46960976-46960620 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr14:50137857-50137501 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 238
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 25

Conread position: 15-361
Cow position: chr14:4991592-4991937 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 12

Conread position: 15-366
Cow position: chr14:38461196-38460852 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 163, 20

Conread position: 15-367
Cow position: chr14:27039809-27040150 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 222
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:10685600-10685949 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:15904789-15904440 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:19318422-19318073 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 163, 16

Conread position: 15-370
Cow position: chr14:22103064-22103413 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:24799148-24798799 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 242
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 71, 17

Conread position: 15-370
Cow position: chr14:26128598-26128947 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:30433076-30432727 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:31683350-31683699 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:33289197-33288848 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:34626364-34626015 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:34630199-34629850 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:34894858-34895207 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 171, 17

Conread position: 15-370
Cow position: chr14:35016985-35016636 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 17

Conread position: 15-370
Cow position: chr14:38047758-38047409 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:38237513-38237862 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr14:49063821-49063472 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 17-363
Cow position: chr14:40999421-40999771 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 224
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 17

Conread position: 19-361
Cow position: chr14:22046987-22047327 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 223
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 35

Conread position: 28-361
Cow position: chr14:34984180-34984516 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 204, 26

Conread position: 29-360
Cow position: chr14:44742040-44741710 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 25

Conread position: 31-370
Cow position: chr14:19459304-19459647 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 201, 23

Conread position: 36-364
Cow position: chr14:46435474-46435148 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 216
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 142, 18

Conread position: 36-370
Cow position: chr14:13417219-13416883 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 196, 87

Conread position: 36-370
Cow position: chr14:32583470-32583802 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 222
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 18

Conread position: 36-370
Cow position: chr14:34355136-34354800 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 224
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 18

Conread position: 37-359
Cow position: chr14:25385538-25385212 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 208
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 17

Conread position: 47-283
Cow position: chr14:43567851-43567604 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 182, 138

Conread position: 52-361
Cow position: chr14:9020391-9020701 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 204
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 74

Conread position: 109-370
Cow position: chr14:14419907-14420175 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 14

Conread position: 111-361
Cow position: chr14:28992857-28993111 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 14

Conread position: 111-367
Cow position: chr14:13309226-13308967 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 17

Conread position: 111-370
Cow position: chr14:5491804-5492067 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 14

Conread position: 111-370
Cow position: chr14:39891689-39891952 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 14

Conread position: 111-370
Cow position: chr14:48250961-48251223 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 14

Conread position: 111-370
Cow position: chr14:49995051-49995313 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 14

Conread position: 112-363
Cow position: chr14:24989812-24990067 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 120, 11

Conread position: 116-361
Cow position: chr14:13385801-13386042 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 12

Conread position: 116-362
Cow position: chr14:43561656-43561406 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 9

Conread position: 116-367
Cow position: chr14:16996258-16996514 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 116-367
Cow position: chr14:23215693-23215438 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 116-370
Cow position: chr14:5379648-5379390 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 116, 9

Conread position: 116-370
Cow position: chr14:16805656-16805914 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 7

Conread position: 116-370
Cow position: chr14:28350222-28350468 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 116-370
Cow position: chr14:32500773-32500521 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 9

Conread position: 117-361
Cow position: chr14:33773460-33773213 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 8

Conread position: 119-360
Cow position: chr14:45069254-45069495 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 29

Conread position: 121-367
Cow position: chr14:46075016-46075268 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 65

Conread position: 122-353
Cow position: chr14:29043917-29044154 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 6, 45

Conread position: 122-367
Cow position: chr14:12272411-12272662 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 52

Conread position: 122-370
Cow position: chr14:8396293-8396547 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr14:13236334-13236586 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr14:24896157-24895904 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 40

Conread position: 122-370
Cow position: chr14:34168785-34168531 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr14:48571867-48572121 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 40

Conread position: 123-355
Cow position: chr14:31946488-31946725 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 105, 62

Conread position: 123-361
Cow position: chr14:46735750-46735993 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 105, 62

Conread position: 123-362
Cow position: chr14:47974416-47974661 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 133

Conread position: 124-361
Cow position: chr14:46085487-46085248 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 42

Conread position: 125-361
Cow position: chr14:5532822-5532583 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 41

Conread position: 125-370
Cow position: chr14:11150433-11150683 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 60

Conread position: 132-360
Cow position: chr14:8985149-8984916 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 34

Conread position: 134-367
Cow position: chr14:7466362-7466600 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr14:748197-748439 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 40

Conread position: 134-370
Cow position: chr14:9483421-9483180 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr14:15999077-15998836 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr14:30927451-30927692 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr14:31156299-31156058 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr14:31737453-31737212 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr14:34345792-34346033 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr14:34476506-34476747 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr14:44296518-44296759 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr14:46126021-46125780 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr14:46848572-46848813 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 39

Conread position: 137-361
Cow position: chr14:25885949-25886178 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 74

Conread position: 137-366
Cow position: chr14:23107809-23108043 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 54

Conread position: 139-361
Cow position: chr14:48492344-48492121 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 132, 46

Conread position: 145-370
Cow position: chr14:35338004-35337775 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 16

Conread position: 154-361
Cow position: chr14:37883451-37883238 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 169-370
Cow position: chr14:5112700-5112908 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 135

Conread position: 171-370
Cow position: chr14:31881450-31881656 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 173-370
Cow position: chr14:21426564-21426767 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.