Cow genome map

Conread name: Lng1-LNG010018E09

Conread position: 7-353
Cow position: chr18:51331858-51331513 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 223
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 222, 18

Conread position: 7-367
Cow position: chr18:43075944-43075592 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr18:6732944-6733298 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr18:27540451-27540094 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 237
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 179, 24

Conread position: 7-370
Cow position: chr18:42608646-42609004 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr18:55555279-55554923 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 171, 25

Conread position: 7-395
Cow position: chr18:10292757-10292373 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 221, 25

Conread position: 8-370
Cow position: chr18:52629230-52629586 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 247
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 170, 24

Conread position: 13-361
Cow position: chr18:29768593-29768245 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 16

Conread position: 13-362
Cow position: chr18:28793393-28793749 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 230
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 82, 16

Conread position: 15-356
Cow position: chr18:11251361-11251696 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 228
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 163, 17

Conread position: 15-366
Cow position: chr18:24036830-24037175 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 232
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 163, 17

Conread position: 15-366
Cow position: chr18:29072437-29072093 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 213, 17

Conread position: 15-366
Cow position: chr18:30677335-30676990 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-367
Cow position: chr18:18215001-18215347 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-367
Cow position: chr18:26485416-26485070 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:19462301-19461952 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:21738399-21738050 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:26883743-26883392 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 183, 17

Conread position: 15-370
Cow position: chr18:27995700-27995351 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:30406346-30406695 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:33616401-33616750 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:37733712-37733361 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 231
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 171, 16

Conread position: 15-370
Cow position: chr18:40059697-40059348 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:42421731-42422080 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:42425593-42425245 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:42629385-42629036 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:51579764-51580113 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr18:55436113-55436462 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 17-367
Cow position: chr18:27833407-27833752 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 215, 15

Conread position: 17-370
Cow position: chr18:27554882-27555229 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 211, 15

Conread position: 28-362
Cow position: chr18:23715620-23715957 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 204, 52

Conread position: 28-363
Cow position: chr18:32323933-32323597 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 210, 68

Conread position: 31-364
Cow position: chr18:32860310-32859977 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 23

Conread position: 36-363
Cow position: chr18:37398992-37398667 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 210
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 201, 11

Conread position: 36-363
Cow position: chr18:51601663-51601989 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 222
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 142, 18

Conread position: 36-367
Cow position: chr18:43431002-43430673 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 140, 18

Conread position: 36-370
Cow position: chr18:28968285-28968617 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 142, 18

Conread position: 36-401
Cow position: chr18:34210211-34210572 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 234
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 193, 18

Conread position: 47-228
Cow position: chr18:14140261-14140438 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 52-363
Cow position: chr18:35878024-35878333 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 43

Conread position: 54-370
Cow position: chr18:32908543-32908225 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 70

Conread position: 55-398
Cow position: chr18:51247642-51247294 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 221
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 177, 124

Conread position: 96-370
Cow position: chr18:43473537-43473258 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 21

Conread position: 107-358
Cow position: chr18:7076362-7076107 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 125, 18

Conread position: 107-369
Cow position: chr18:32218659-32218927 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 182
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 19, 60

Conread position: 109-363
Cow position: chr18:17324311-17324054 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 124, 78

Conread position: 110-367
Cow position: chr18:51485525-51485262 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 111-358
Cow position: chr18:21304438-21304188 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 121, 14

Conread position: 111-367
Cow position: chr18:23802955-23802695 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 67, 14

Conread position: 113-363
Cow position: chr18:10101039-10100785 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 119, 49

Conread position: 116-361
Cow position: chr18:32121754-32122002 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 9

Conread position: 116-361
Cow position: chr18:37153504-37153753 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 7

Conread position: 116-367
Cow position: chr18:2609134-2609389 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 9

Conread position: 116-370
Cow position: chr18:727216-726956 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 112, 9

Conread position: 116-370
Cow position: chr18:16227150-16226892 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 9

Conread position: 116-370
Cow position: chr18:25355445-25355187 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 7

Conread position: 116-370
Cow position: chr18:33299493-33299231 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 141

Conread position: 116-370
Cow position: chr18:33523162-33522904 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 112, 9

Conread position: 116-370
Cow position: chr18:51458915-51459173 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 121-370
Cow position: chr18:16857713-16857457 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 47

Conread position: 122-370
Cow position: chr18:16082412-16082159 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 52

Conread position: 122-370
Cow position: chr18:50114362-50114615 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 40

Conread position: 123-361
Cow position: chr18:45904320-45904563 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 43

Conread position: 124-361
Cow position: chr18:28658332-28658575 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 67

Conread position: 124-370
Cow position: chr18:8967580-8967329 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 108, 61

Conread position: 125-361
Cow position: chr18:41238447-41238207 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 49, 41

Conread position: 125-404
Cow position: chr18:23949835-23950110 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 189
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 41

Conread position: 127-370
Cow position: chr18:35637733-35637485 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 58

Conread position: 128-361
Cow position: chr18:7955719-7955482 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 101, 57

Conread position: 132-359
Cow position: chr18:56151086-56151318 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 96, 53

Conread position: 132-361
Cow position: chr18:268481-268715 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 59

Conread position: 132-361
Cow position: chr18:42966406-42966172 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 106, 53

Conread position: 133-370
Cow position: chr18:43284184-43284423 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 38

Conread position: 134-361
Cow position: chr18:9365456-9365224 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 32

Conread position: 134-363
Cow position: chr18:36224347-36224113 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 98, 44

Conread position: 134-370
Cow position: chr18:3805499-3805258 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr18:4432639-4432399 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr18:13270815-13270574 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr18:17742410-17742169 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr18:24620326-24620091 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr18:25006015-25006256 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr18:26568493-26568252 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr18:29079650-29079409 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr18:30843994-30844234 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr18:31201942-31201701 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr18:50092535-50092773 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 39

Conread position: 134-370
Cow position: chr18:55022714-55022472 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 135-370
Cow position: chr18:51346200-51345960 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 31

Conread position: 137-366
Cow position: chr18:22181543-22181778 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 166

Conread position: 137-370
Cow position: chr18:23687986-23688225 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 48

Conread position: 137-370
Cow position: chr18:33407201-33406963 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 57

Conread position: 137-370
Cow position: chr18:43463861-43464098 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 50

Conread position: 139-361
Cow position: chr18:5076276-5076502 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 93, 45

Conread position: 140-370
Cow position: chr18:40253094-40253329 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 33

Conread position: 146-370
Cow position: chr18:42242439-42242669 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 33

Conread position: 149-370
Cow position: chr18:18445256-18445030 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 12

Conread position: 171-370
Cow position: chr18:30607574-30607368 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 171-370
Cow position: chr18:54365938-54366144 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 7, 123

Conread position: 171-385
Cow position: chr18:215784-216009 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 133

Conread position: 179-370
Cow position: chr18:36183532-36183729 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 179-370
Cow position: chr18:54118875-54119072 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 181-398
Cow position: chr18:33272472-33272248 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.