Cow genome map


           Conread name:
           Lng1-LNG010018E09
        

               Conread position:
               7-353
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               222, 18
               

               Conread position:
               7-367
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               179, 24
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-395
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               221, 25
               

               Conread position:
               8-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               170, 24
               

               Conread position:
               13-361
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               13-362
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               15-356
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-366
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-366
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               15-366
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-367
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-367
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               183, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               171, 16
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               17-367
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               215, 15
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               211, 15
               

               Conread position:
               28-362
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               204, 52
               

               Conread position:
               28-363
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               210, 68
               

               Conread position:
               31-364
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               36-363
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               201, 11
               

               Conread position:
               36-363
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               142, 18
               

               Conread position:
               36-367
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               142, 18
               

               Conread position:
               36-401
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               193, 18
               

               Conread position:
               47-228
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               52-363
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               87, 43
               

               Conread position:
               54-370
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 70
               

               Conread position:
               55-398
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               177, 124
               

               Conread position:
               96-370
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 21
               

               Conread position:
               107-358
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               125, 18
               

               Conread position:
               107-369
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               109-363
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               124, 78
               

               Conread position:
               110-367
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               111-358
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               113-363
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               119, 49
               

               Conread position:
               116-361
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               116-361
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               116-367
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               117, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               108, 141
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               121-370
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               6, 52
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               6, 40
               

               Conread position:
               123-361
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               64, 43
               

               Conread position:
               124-361
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               124-370
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               125-361
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               49, 41
               

               Conread position:
               125-404
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               127-370
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               128-361
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               101, 57
               

               Conread position:
               132-359
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               96, 53
               

               Conread position:
               132-361
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               100, 59
               

               Conread position:
               132-361
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               106, 53
               

               Conread position:
               133-370
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               102, 38
               

               Conread position:
               134-361
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-363
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               98, 44
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               135-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               137-366
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 166
               

               Conread position:
               137-370
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 48
               

               Conread position:
               137-370
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               95, 57
               

               Conread position:
               137-370
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 50
               

               Conread position:
               139-361
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               93, 45
               

               Conread position:
               140-370
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               146-370
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               86, 33
               

               Conread position:
               149-370
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               7, 123
               

               Conread position:
               171-385
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 133
               

               Conread position:
               179-370
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               179-370
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               181-398
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               51, 0
               
Show alignments to all cow chromosomes.