Cow genome map
| Conread name: | Lng1-LNG010018E09 |
| Conread position: | 7-362 |
| Cow position: | chr19:18393406-18393760 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 144, 40 |
| Conread position: | 7-370 |
| Cow position: | chr19:23488789-23488434 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 221, 25 |
| Conread position: | 7-370 |
| Cow position: | chr19:24735172-24734815 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr19:30515007-30515364 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr19:33118689-33119046 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 171, 24 |
| Conread position: | 7-370 |
| Cow position: | chr19:42304586-42304945 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 221, 25 |
| Conread position: | 8-370 |
| Cow position: | chr19:6532493-6532137 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 170, 24 |
| Conread position: | 15-358 |
| Cow position: | chr19:54541966-54542304 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 15-367 |
| Cow position: | chr19:43149607-43149264 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 163, 16 |
| Conread position: | 15-370 |
| Cow position: | chr19:235717-236066 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr19:3228495-3228146 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr19:3407207-3406858 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr19:4283271-4283620 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr19:8205992-8206341 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 162, 17 |
| Conread position: | 15-370 |
| Cow position: | chr19:35082256-35081907 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr19:41223636-41223985 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr19:42156602-42156253 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 213, 17 |
| Conread position: | 15-381 |
| Cow position: | chr19:634417-634058 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 31-284 |
| Cow position: | chr19:8965134-8964875 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 176, 16 |
| Conread position: | 36-359 |
| Cow position: | chr19:8033208-8032887 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 36-361 |
| Cow position: | chr19:14573048-14572721 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 36-367 |
| Cow position: | chr19:12652885-12652556 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 18 |
| Conread position: | 36-367 |
| Cow position: | chr19:42647382-42647709 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 196, 20 |
| Conread position: | 36-370 |
| Cow position: | chr19:36352279-36351946 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 199, 18 |
| Conread position: | 36-370 |
| Cow position: | chr19:38983690-38983355 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 93, 19 |
| Conread position: | 64-363 |
| Cow position: | chr19:3601927-3602233 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 72-362 |
| Cow position: | chr19:5175524-5175810 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 89-363 |
| Cow position: | chr19:38735772-38735489 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 107-361 |
| Cow position: | chr19:7189994-7190249 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 126, 18 |
| Conread position: | 109-356 |
| Cow position: | chr19:2260509-2260757 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 56 |
| Conread position: | 109-370 |
| Cow position: | chr19:26803820-26804084 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 123, 76 |
| Conread position: | 110-363 |
| Cow position: | chr19:22859899-22860169 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 59, 43 |
| Conread position: | 110-370 |
| Cow position: | chr19:40439531-40439266 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 111-366 |
| Cow position: | chr19:10206911-10206657 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 207 |
| Conread position: | 111-367 |
| Cow position: | chr19:30237646-30237385 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 111-370 |
| Cow position: | chr19:4460802-4461065 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 111-370 |
| Cow position: | chr19:34905384-34905647 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 113-370 |
| Cow position: | chr19:31783876-31783617 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 116-361 |
| Cow position: | chr19:39338933-39339177 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 116-370 |
| Cow position: | chr19:1580969-1581227 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 116-370 |
| Cow position: | chr19:2249548-2249806 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 116-370 |
| Cow position: | chr19:5679715-5679973 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 116-370 |
| Cow position: | chr19:14180065-14180323 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 116-370 |
| Cow position: | chr19:28450792-28450531 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 116-370 |
| Cow position: | chr19:33585932-33586188 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 116-370 |
| Cow position: | chr19:33932539-33932793 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 9 |
| Conread position: | 116-401 |
| Cow position: | chr19:44396930-44396646 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 117, 9 |
| Conread position: | 121-370 |
| Cow position: | chr19:8567294-8567038 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 122-370 |
| Cow position: | chr19:30540461-30540715 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 124-370 |
| Cow position: | chr19:7053728-7053977 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 108, 67 |
| Conread position: | 124-370 |
| Cow position: | chr19:19919887-19920137 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 111, 27 |
| Conread position: | 124-374 |
| Cow position: | chr19:32450661-32450406 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 132-370 |
| Cow position: | chr19:35362638-35362881 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 132-370 |
| Cow position: | chr19:39924257-39924013 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 134-356 |
| Cow position: | chr19:3473097-3472870 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 39 |
| Conread position: | 134-366 |
| Cow position: | chr19:55163738-55163975 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-367 |
| Cow position: | chr19:475278-475042 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 134-370 |
| Cow position: | chr19:1169004-1169244 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 94, 32 |
| Conread position: | 134-370 |
| Cow position: | chr19:4448128-4447890 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 37 |
| Conread position: | 134-370 |
| Cow position: | chr19:20433324-20433564 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 134-370 |
| Cow position: | chr19:26518417-26518658 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-370 |
| Cow position: | chr19:29108483-29108242 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr19:35142739-35142978 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 134-370 |
| Cow position: | chr19:54376002-54376244 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 137-360 |
| Cow position: | chr19:6531522-6531297 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 57 |
| Conread position: | 137-370 |
| Cow position: | chr19:10196324-10196086 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 137-370 |
| Cow position: | chr19:15719998-15720237 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 140-370 |
| Cow position: | chr19:20108293-20108058 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 150-385 |
| Cow position: | chr19:18476376-18476614 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 179-370 |
| Cow position: | chr19:1503622-1503425 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 201-370 |
| Cow position: | chr19:41204374-41204549 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.