Cow genome map


           Conread name:
           Lng1-LNG010018E09
        

               Conread position:
               6-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               172, 26
               

               Conread position:
               7-311
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               222, 25
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               153, 25
               

               Conread position:
               7-366
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               217, 20
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               221, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               8-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               170, 24
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               209, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               113, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               16-370
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               212, 16
               

               Conread position:
               17-361
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               161, 15
               

               Conread position:
               17-363
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               215, 10
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               215, 15
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               161, 15
               

               Conread position:
               19-228
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 159
               

               Conread position:
               31-363
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               35-361
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               53, 49
               

               Conread position:
               35-370
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               197, 20
               

               Conread position:
               36-363
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               36-363
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               185, 18
               

               Conread position:
               36-366
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               196, 18
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               51, 18
               

               Conread position:
               37-363
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               95, 17
               

               Conread position:
               52-370
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               74-363
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               61, 102
               

               Conread position:
               89-363
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               139, 96
               

               Conread position:
               111-363
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               103, 12
               

               Conread position:
               111-363
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               111-366
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               123, 14
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               111-395
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               116-358
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               116-358
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               143, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               151, 12
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               116-371
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               120-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               108, 74
               

               Conread position:
               120-370
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               122-367
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 43
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               6, 40
               

               Conread position:
               124-360
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               111, 12
               

               Conread position:
               125-370
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               134-361
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               98, 37
               

               Conread position:
               134-361
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 53
               

               Conread position:
               134-361
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 51
               

               Conread position:
               134-366
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-401
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               137-361
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 50
               

               Conread position:
               137-370
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               91, 48
               

               Conread position:
               137-370
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               140-371
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               151-370
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               155-370
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               7, 133
               
Show alignments to all cow chromosomes.