Cow genome map

Conread name: Lng1-LNG010018E09

Conread position: 6-370
Cow position: chr20:29284610-29284967 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 172, 26

Conread position: 7-311
Cow position: chr20:3135665-3135362 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 222, 25

Conread position: 7-361
Cow position: chr20:14326621-14326966 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 153, 25

Conread position: 7-366
Cow position: chr20:39391144-39391497 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr20:8246992-8247349 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr20:10100121-10099764 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr20:10759730-10760084 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 217, 20

Conread position: 7-370
Cow position: chr20:18162784-18162427 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 245
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 221, 25

Conread position: 7-370
Cow position: chr20:22274111-22274468 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr20:29784472-29784115 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr20:35170040-35169685 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 8-370
Cow position: chr20:18651605-18651250 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 170, 24

Conread position: 15-370
Cow position: chr20:754431-754082 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:1761783-1761435 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 213, 17

Conread position: 15-370
Cow position: chr20:5502751-5503100 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:11330421-11330770 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:13303309-13303658 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:17864114-17863765 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:18091624-18091971 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 171, 17

Conread position: 15-370
Cow position: chr20:22060188-22060537 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:25122247-25122596 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:26737460-26737809 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:28324468-28324119 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:30480099-30479750 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:30736649-30737002 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 209, 17

Conread position: 15-370
Cow position: chr20:30908949-30908600 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:31784323-31784672 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:33021665-33021316 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:36310513-36310862 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:36424471-36424122 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:36854731-36854382 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 113, 17

Conread position: 15-370
Cow position: chr20:39269750-39270099 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr20:41975798-41975449 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 238
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 213, 17

Conread position: 16-370
Cow position: chr20:326511-326163 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 212, 16

Conread position: 17-361
Cow position: chr20:25844320-25844658 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 223
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 161, 15

Conread position: 17-363
Cow position: chr20:13048670-13049013 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 226
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 215, 10

Conread position: 17-370
Cow position: chr20:26825875-26826221 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 225
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 215, 15

Conread position: 17-370
Cow position: chr20:29370431-29370779 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 161, 15

Conread position: 19-228
Cow position: chr20:22193647-22193856 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 159

Conread position: 31-363
Cow position: chr20:19340331-19340665 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 213
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 23

Conread position: 35-361
Cow position: chr20:10200100-10199774 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 49

Conread position: 35-370
Cow position: chr20:7110385-7110721 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 211
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 197, 20

Conread position: 36-363
Cow position: chr20:7182975-7183310 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 0

Conread position: 36-363
Cow position: chr20:19352029-19352359 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 208
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 185, 18

Conread position: 36-366
Cow position: chr20:22209594-22209266 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 211
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 196, 18

Conread position: 36-370
Cow position: chr20:7803474-7803811 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 215
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 18

Conread position: 36-370
Cow position: chr20:26052381-26052712 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 225
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 18

Conread position: 37-363
Cow position: chr20:38028262-38028593 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 17

Conread position: 52-370
Cow position: chr20:23681555-23681876 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 204
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 51

Conread position: 74-363
Cow position: chr20:5786865-5786569 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 195
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 102

Conread position: 89-363
Cow position: chr20:8654069-8653797 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 139, 96

Conread position: 111-363
Cow position: chr20:14512601-14512339 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 12

Conread position: 111-363
Cow position: chr20:35036364-35036618 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 14

Conread position: 111-366
Cow position: chr20:17657329-17657588 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 14

Conread position: 111-367
Cow position: chr20:10919652-10919911 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 123, 14

Conread position: 111-367
Cow position: chr20:15089470-15089729 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 14

Conread position: 111-367
Cow position: chr20:27877386-27877127 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 121, 14

Conread position: 111-370
Cow position: chr20:23803054-23802791 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 14

Conread position: 111-370
Cow position: chr20:30689775-30689513 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 12

Conread position: 111-395
Cow position: chr20:12567424-12567709 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 191
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 14

Conread position: 116-358
Cow position: chr20:10913676-10913923 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 116, 9

Conread position: 116-358
Cow position: chr20:20438136-20438381 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 112, 9

Conread position: 116-370
Cow position: chr20:1024354-1024612 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 112, 9

Conread position: 116-370
Cow position: chr20:1580624-1580882 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 9

Conread position: 116-370
Cow position: chr20:6238989-6239244 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 143, 9

Conread position: 116-370
Cow position: chr20:6258404-6258654 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 151, 12

Conread position: 116-370
Cow position: chr20:8446311-8446053 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 62, 9

Conread position: 116-370
Cow position: chr20:9588248-9587991 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 116-370
Cow position: chr20:13493395-13493137 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 168
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 113, 9

Conread position: 116-370
Cow position: chr20:20778882-20779139 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 169
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 116, 9

Conread position: 116-370
Cow position: chr20:28246523-28246781 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 62, 9

Conread position: 116-371
Cow position: chr20:24398968-24399226 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 116, 9

Conread position: 120-370
Cow position: chr20:16558636-16558891 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 74

Conread position: 120-370
Cow position: chr20:31505230-31504974 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 47

Conread position: 122-367
Cow position: chr20:21720431-21720180 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 43

Conread position: 122-370
Cow position: chr20:14837080-14836826 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr20:28099918-28100172 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 40

Conread position: 124-360
Cow position: chr20:10338311-10338075 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 111, 12

Conread position: 125-370
Cow position: chr20:28165727-28165476 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 134-361
Cow position: chr20:5634454-5634681 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 98, 37

Conread position: 134-361
Cow position: chr20:23792243-23792012 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 101, 53

Conread position: 134-361
Cow position: chr20:27152471-27152239 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 51

Conread position: 134-366
Cow position: chr20:18169022-18168785 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 45

Conread position: 134-370
Cow position: chr20:5958263-5958504 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr20:6135109-6135350 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 51

Conread position: 134-370
Cow position: chr20:7080934-7081175 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr20:12176608-12176849 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 39

Conread position: 134-370
Cow position: chr20:14878175-14877934 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 39

Conread position: 134-370
Cow position: chr20:15539422-15539662 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 32

Conread position: 134-370
Cow position: chr20:20764795-20764554 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr20:24567390-24567631 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr20:24621082-24620841 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr20:32451473-32451714 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr20:33303846-33304087 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr20:40503840-40504081 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 27

Conread position: 134-401
Cow position: chr20:13505700-13505974 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 32

Conread position: 137-361
Cow position: chr20:14806524-14806298 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 50

Conread position: 137-370
Cow position: chr20:16516202-16515964 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 91, 48

Conread position: 137-370
Cow position: chr20:35073260-35073023 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 24

Conread position: 140-371
Cow position: chr20:19046231-19046467 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 21

Conread position: 151-370
Cow position: chr20:5086842-5086618 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 10

Conread position: 155-370
Cow position: chr20:24388266-24388487 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 171-370
Cow position: chr20:4579195-4579401 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 171-370
Cow position: chr20:9223698-9223493 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 171-370
Cow position: chr20:11888144-11888350 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 7, 133

Show alignments to all cow chromosomes.