Cow genome map

Conread name: Lng1-LNG010018E09

Conread position: 7-361
Cow position: chr24:20221210-20220863 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr24:3163491-3163134 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr24:5990167-5990524 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr24:6325351-6325708 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr24:7596542-7596899 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr24:16653984-16654341 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr24:17188251-17188609 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 244
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr24:18113477-18113119 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 221, 25

Conread position: 7-370
Cow position: chr24:22795576-22795222 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 241
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr24:36308597-36308240 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 171, 25

Conread position: 13-367
Cow position: chr24:13373493-13373839 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 233
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 165, 19

Conread position: 15-365
Cow position: chr24:12518826-12518483 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-366
Cow position: chr24:11215375-11215720 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:1840858-1841207 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:2118883-2118534 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:4667093-4666745 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:8754528-8754179 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:10035031-10035380 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:11311510-11311861 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 163, 24

Conread position: 15-370
Cow position: chr24:12377104-12377452 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 163, 16

Conread position: 15-370
Cow position: chr24:13319442-13319791 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:17456060-17455711 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:18234787-18234438 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 213, 17

Conread position: 15-370
Cow position: chr24:18740356-18740705 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:25373115-25372766 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:26795429-26795080 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:35877248-35877597 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:38297069-38296720 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:40427679-40428030 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 234
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 165, 17

Conread position: 15-370
Cow position: chr24:40789582-40789931 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr24:42693726-42694075 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 17-367
Cow position: chr24:19815404-19815748 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 231
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 15

Conread position: 31-257
Cow position: chr24:22924266-22924038 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 200, 23

Conread position: 35-363
Cow position: chr24:32759119-32759449 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 216
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 197, 19

Conread position: 36-359
Cow position: chr24:16610785-16611105 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 214
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 192, 19

Conread position: 36-362
Cow position: chr24:7189047-7189388 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 197, 20

Conread position: 36-362
Cow position: chr24:17216227-17216547 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 18

Conread position: 36-363
Cow position: chr24:5849742-5850071 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 18

Conread position: 36-367
Cow position: chr24:20283217-20283545 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 214
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 199, 19

Conread position: 36-370
Cow position: chr24:13497296-13496964 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 142, 18

Conread position: 37-362
Cow position: chr24:16537052-16537370 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 217
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 201, 17

Conread position: 37-363
Cow position: chr24:26901914-26901584 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 192, 10

Conread position: 37-370
Cow position: chr24:3512654-3512985 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 141, 17

Conread position: 37-370
Cow position: chr24:3515533-3515864 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 221
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 141, 17

Conread position: 52-370
Cow position: chr24:17864790-17865107 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 126, 53

Conread position: 64-370
Cow position: chr24:28724073-28723759 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 124

Conread position: 107-363
Cow position: chr24:6508205-6508467 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 81

Conread position: 107-366
Cow position: chr24:41006407-41006139 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 20

Conread position: 109-361
Cow position: chr24:40445569-40445321 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 159, 19

Conread position: 111-364
Cow position: chr24:19679468-19679211 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 14

Conread position: 111-366
Cow position: chr24:12090898-12090643 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 14

Conread position: 111-370
Cow position: chr24:16558087-16558350 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 12

Conread position: 111-370
Cow position: chr24:17544036-17544297 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 14

Conread position: 115-370
Cow position: chr24:10243638-10243898 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 10

Conread position: 116-367
Cow position: chr24:15875273-15875019 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 18

Conread position: 121-370
Cow position: chr24:14249663-14249919 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 47

Conread position: 122-367
Cow position: chr24:12293611-12293359 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 122-370
Cow position: chr24:5929696-5929442 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr24:15297033-15296779 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr24:19406571-19406825 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 40

Conread position: 122-370
Cow position: chr24:26412964-26412710 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 6, 40

Conread position: 122-370
Cow position: chr24:28494661-28494407 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 40

Conread position: 122-370
Cow position: chr24:36027597-36027851 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 73

Conread position: 122-370
Cow position: chr24:40518696-40518949 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 34

Conread position: 125-370
Cow position: chr24:31370379-31370629 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 167

Conread position: 126-361
Cow position: chr24:31816136-31815902 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 106, 65

Conread position: 127-370
Cow position: chr24:6020167-6020415 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 39

Conread position: 127-370
Cow position: chr24:39159961-39160208 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 20

Conread position: 132-356
Cow position: chr24:33291597-33291825 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 103, 39

Conread position: 132-370
Cow position: chr24:17566752-17566509 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 59

Conread position: 133-363
Cow position: chr24:36555253-36555488 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 52

Conread position: 134-358
Cow position: chr24:40272746-40272518 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 94, 32

Conread position: 134-361
Cow position: chr24:29679733-29679964 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 45

Conread position: 134-367
Cow position: chr24:24818691-24818928 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 32

Conread position: 134-367
Cow position: chr24:29083754-29083998 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 39

Conread position: 134-370
Cow position: chr24:207101-207337 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr24:3794394-3794146 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 134-370
Cow position: chr24:11080878-11081119 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr24:11104247-11104488 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr24:11207702-11207943 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr24:12447396-12447155 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr24:13542283-13542524 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr24:14353250-14353009 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 28

Conread position: 134-370
Cow position: chr24:15084484-15084243 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr24:20604654-20604412 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 94, 169

Conread position: 134-370
Cow position: chr24:35793753-35793512 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 94, 51

Conread position: 134-370
Cow position: chr24:40381933-40382174 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr24:43906763-43906522 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 140-367
Cow position: chr24:8331599-8331831 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 21

Conread position: 140-367
Cow position: chr24:33639599-33639831 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 26

Conread position: 140-370
Cow position: chr24:9044798-9045033 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 21

Conread position: 149-370
Cow position: chr24:36105817-36106043 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 12

Conread position: 171-370
Cow position: chr24:38488129-38487923 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 179-370
Cow position: chr24:12697740-12697543 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 181-361
Cow position: chr24:29170517-29170333 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 122

Conread position: 194-370
Cow position: chr24:27345050-27345232 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Show alignments to all cow chromosomes.