Cow genome map
| Conread name: | Lng1-LNG010018E09 |
| Conread position: | 7-370 |
| Cow position: | chr25:8656007-8655650 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr25:26756185-26755828 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-371 |
| Cow position: | chr25:7069238-7068880 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 12-370 |
| Cow position: | chr25:13333133-13332774 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 13-370 |
| Cow position: | chr25:35554380-35554029 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 215, 19 |
| Conread position: | 15-361 |
| Cow position: | chr25:7717649-7717309 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-366 |
| Cow position: | chr25:36351448-36351103 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:8935506-8935157 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:10158451-10158102 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:14555377-14555028 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:15428970-15429319 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:15618405-15618058 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 163, 16 |
| Conread position: | 15-370 |
| Cow position: | chr25:19138863-19139211 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:20771629-20771976 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:22198291-22197942 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:23601234-23601583 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:32609710-32610059 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:33901673-33902022 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:34121384-34121734 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 213, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:35589779-35589438 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr25:35649542-35649193 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 17-370 |
| Cow position: | chr25:28863577-28863230 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 161, 14 |
| Conread position: | 36-358 |
| Cow position: | chr25:33205911-33206235 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 196, 149 |
| Conread position: | 36-370 |
| Cow position: | chr25:23410352-23410013 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 36-370 |
| Cow position: | chr25:34501994-34502326 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 142, 18 |
| Conread position: | 36-370 |
| Cow position: | chr25:35446633-35446302 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 196, 19 |
| Conread position: | 36-370 |
| Cow position: | chr25:36765608-36765940 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 141, 18 |
| Conread position: | 58-367 |
| Cow position: | chr25:25510564-25510253 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 64-355 |
| Cow position: | chr25:24302594-24302891 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 40 |
| Conread position: | 85-360 |
| Cow position: | chr25:1024793-1025071 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 142, 102 |
| Conread position: | 107-370 |
| Cow position: | chr25:34508551-34508821 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 61 |
| Conread position: | 111-361 |
| Cow position: | chr25:36392344-36392599 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 111-366 |
| Cow position: | chr25:17994674-17994933 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 116-361 |
| Cow position: | chr25:17562683-17562433 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 116-370 |
| Cow position: | chr25:29802126-29802384 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 9 |
| Conread position: | 122-370 |
| Cow position: | chr25:4857883-4858137 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 122-370 |
| Cow position: | chr25:13955775-13956029 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 122-370 |
| Cow position: | chr25:34163947-34164201 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 124-370 |
| Cow position: | chr25:17658221-17657973 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 135, 54 |
| Conread position: | 125-367 |
| Cow position: | chr25:10580483-10580730 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 126-361 |
| Cow position: | chr25:17992537-17992777 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 127-361 |
| Cow position: | chr25:20785926-20786165 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 106, 67 |
| Conread position: | 132-363 |
| Cow position: | chr25:32606921-32607151 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 135, 34 |
| Conread position: | 134-370 |
| Cow position: | chr25:9055261-9055020 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 101, 51 |
| Conread position: | 134-370 |
| Cow position: | chr25:17808181-17808418 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr25:18189777-18190018 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 134-370 |
| Cow position: | chr25:19367099-19367338 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 98, 59 |
| Conread position: | 134-370 |
| Cow position: | chr25:19530774-19531015 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr25:25794310-25794551 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr25:27076659-27076419 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr25:33990066-33990307 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-371 |
| Cow position: | chr25:36127303-36127548 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 137-361 |
| Cow position: | chr25:12755838-12756067 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 140-370 |
| Cow position: | chr25:17553673-17553909 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 146-370 |
| Cow position: | chr25:17993933-17994162 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 32, 15 |
| Conread position: | 162-363 |
| Cow position: | chr25:11540698-11540491 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 171-370 |
| Cow position: | chr25:14755848-14756054 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 179-370 |
| Cow position: | chr25:17585458-17585655 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 152 |
Show alignments to all cow chromosomes.