Cow genome map
| Conread name: | Lng1-LNG010018E09 |
| Conread position: | 5-158 |
| Cow position: | chr26:15532718-15532862 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 5-158 |
| Cow position: | chr26:17280407-17280261 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 7-370 |
| Cow position: | chr26:7951263-7950906 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr26:8084800-8084443 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr26:8885815-8885459 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 221, 25 |
| Conread position: | 7-370 |
| Cow position: | chr26:16865249-16864892 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 171, 27 |
| Conread position: | 7-370 |
| Cow position: | chr26:29434206-29433849 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 221, 25 |
| Conread position: | 7-372 |
| Cow position: | chr26:35304018-35303659 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 15-366 |
| Cow position: | chr26:2487469-2487124 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-367 |
| Cow position: | chr26:7558640-7558998 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 15-367 |
| Cow position: | chr26:18858081-18857734 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 213, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:1089144-1088794 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:1636450-1636797 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 213, 16 |
| Conread position: | 15-370 |
| Cow position: | chr26:2479169-2479518 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 155, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:3571074-3571423 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:3571480-3571829 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:4486476-4486127 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:7677700-7677351 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:15146460-15146111 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:19181111-19181460 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:26612422-26612073 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:30754580-30754231 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr26:34265930-34265581 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-374 |
| Cow position: | chr26:15158819-15158465 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 213, 17 |
| Conread position: | 15-378 |
| Cow position: | chr26:4807121-4806764 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 17-363 |
| Cow position: | chr26:8651859-8652209 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 10 |
| Conread position: | 17-370 |
| Cow position: | chr26:8405137-8404790 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 161, 15 |
| Conread position: | 36-363 |
| Cow position: | chr26:19326911-19326594 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 231, 11 |
| Conread position: | 36-363 |
| Cow position: | chr26:20766585-20766254 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 139, 130 |
| Conread position: | 37-370 |
| Cow position: | chr26:23600087-23600418 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 187, 17 |
| Conread position: | 47-363 |
| Cow position: | chr26:25807512-25807189 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 182, 132 |
| Conread position: | 52-355 |
| Cow position: | chr26:21638882-21639188 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 180, 37 |
| Conread position: | 52-363 |
| Cow position: | chr26:19791473-19791786 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 59 |
| Conread position: | 53-363 |
| Cow position: | chr26:2610134-2610449 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 101-362 |
| Cow position: | chr26:1613662-1613918 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 170, 5 |
| Conread position: | 104-362 |
| Cow position: | chr26:13739254-13739511 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 128, 30 |
| Conread position: | 106-361 |
| Cow position: | chr26:11370572-11370316 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 17 |
| Conread position: | 109-363 |
| Cow position: | chr26:9632698-9632956 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 110-361 |
| Cow position: | chr26:6487212-6487468 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 127, 69 |
| Conread position: | 111-361 |
| Cow position: | chr26:19347546-19347801 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 111-366 |
| Cow position: | chr26:6840820-6841079 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 111-366 |
| Cow position: | chr26:6843342-6843601 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 12 |
| Conread position: | 111-367 |
| Cow position: | chr26:14897968-14897708 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 111-370 |
| Cow position: | chr26:6430446-6430183 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 111-381 |
| Cow position: | chr26:11904315-11904039 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 114-370 |
| Cow position: | chr26:17798721-17798980 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 64, 19 |
| Conread position: | 116-359 |
| Cow position: | chr26:20059163-20058917 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 116-360 |
| Cow position: | chr26:8820417-8820666 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 116-361 |
| Cow position: | chr26:2246574-2246323 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 97 |
| Conread position: | 116-361 |
| Cow position: | chr26:14395603-14395853 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 116, 9 |
| Conread position: | 116-370 |
| Cow position: | chr26:8873718-8873462 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 112, 17 |
| Conread position: | 116-382 |
| Cow position: | chr26:22659414-22659685 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 116, 63 |
| Conread position: | 117-361 |
| Cow position: | chr26:8810726-8810481 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 8 |
| Conread position: | 117-361 |
| Cow position: | chr26:28320045-28320292 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 115, 8 |
| Conread position: | 118-361 |
| Cow position: | chr26:2676385-2676633 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 114, 73 |
| Conread position: | 121-370 |
| Cow position: | chr26:3096776-3097032 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 122-370 |
| Cow position: | chr26:1346123-1346377 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 122-370 |
| Cow position: | chr26:35560192-35560446 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 124-361 |
| Cow position: | chr26:13706363-13706602 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 108, 70 |
| Conread position: | 125-370 |
| Cow position: | chr26:5680406-5680156 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 53, 41 |
| Conread position: | 132-370 |
| Cow position: | chr26:23890262-23890020 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 133-363 |
| Cow position: | chr26:17676468-17676702 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 105, 28 |
| Conread position: | 134-370 |
| Cow position: | chr26:1342436-1342678 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr26:2226948-2226707 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr26:2318330-2318572 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 134-370 |
| Cow position: | chr26:5429954-5430195 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-370 |
| Cow position: | chr26:9115896-9115655 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 134-370 |
| Cow position: | chr26:11537683-11537442 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr26:16887777-16888018 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr26:18929133-18928892 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr26:20019951-20019710 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-370 |
| Cow position: | chr26:22531297-22531535 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-370 |
| Cow position: | chr26:22692243-22692002 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-370 |
| Cow position: | chr26:28706205-28706446 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-370 |
| Cow position: | chr26:30593782-30594023 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-370 |
| Cow position: | chr26:30717142-30716902 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr26:33879196-33879431 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 32 |
| Conread position: | 134-370 |
| Cow position: | chr26:35121385-35121626 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 154-363 |
| Cow position: | chr26:15532895-15533102 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 179-370 |
| Cow position: | chr26:4439957-4440154 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 180-370 |
| Cow position: | chr26:11296591-11296787 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 381-671 |
| Cow position: | chr26:15533511-15533795 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 56 |
Show alignments to all cow chromosomes.