Cow genome map


           Conread name:
           Lng1-LNG010018E09
        

               Conread position:
               5-158
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               5-158
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               221, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               171, 27
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               221, 25
               

               Conread position:
               7-372
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               15-366
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-367
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               15-367
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               213, 16
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-374
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               15-378
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               17-363
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               161, 15
               

               Conread position:
               36-363
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               231, 11
               

               Conread position:
               36-363
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               139, 130
               

               Conread position:
               37-370
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               187, 17
               

               Conread position:
               47-363
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               182, 132
               

               Conread position:
               52-355
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               180, 37
               

               Conread position:
               52-363
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               53-363
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 76
               

               Conread position:
               101-362
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               170, 5
               

               Conread position:
               104-362
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               106-361
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               126, 17
               

               Conread position:
               109-363
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               110-361
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               127, 69
               

               Conread position:
               111-361
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-366
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 12
               

               Conread position:
               111-366
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               121, 12
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               111-381
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               114-370
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               116-359
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               116-360
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               116-361
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               70, 97
               

               Conread position:
               116-361
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               112, 17
               

               Conread position:
               116-382
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               116, 63
               

               Conread position:
               117-361
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               118, 8
               

               Conread position:
               117-361
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               115, 8
               

               Conread position:
               118-361
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               114, 73
               

               Conread position:
               121-370
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               124-361
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               108, 70
               

               Conread position:
               125-370
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               132-370
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               133-363
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 28
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               94, 51
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               154-363
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               179-370
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               180-370
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               381-671
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 56
               
Show alignments to all cow chromosomes.