Cow genome map


           Conread name:
           Lng1-LNG010018E09
        

               Conread position:
               5-370
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               124, 27
               

               Conread position:
               7-361
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               225, 25
               

               Conread position:
               7-367
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               221, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               15-361
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               206, 18
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               163, 16
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-371
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-377
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               215, 15
               

               Conread position:
               30-361
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               31-366
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               35-370
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               36-358
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               196, 19
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               142, 18
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               142, 18
               

               Conread position:
               37-358
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               191, 17
               

               Conread position:
               74-370
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               160, 27
               

               Conread position:
               81-363
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               151, 42
               

               Conread position:
               85-362
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               152, 93
               

               Conread position:
               102-370
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               138, 21
               

               Conread position:
               106-364
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               109-363
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               119, 14
               

               Conread position:
               110-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               122, 75
               

               Conread position:
               111-366
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               121, 74
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               124, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               113-370
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 22
               

               Conread position:
               115-363
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               115-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               115-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               117, 49
               

               Conread position:
               116-361
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               112, 7
               

               Conread position:
               121-370
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               6, 41
               

               Conread position:
               122-385
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               124-361
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               124-370
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               108, 67
               

               Conread position:
               125-367
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               110, 60
               

               Conread position:
               134-360
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 51
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               137-370
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               7, 133
               
Show alignments to all cow chromosomes.