Cow genome map
| Conread name: | Lng1-LNG010018E09 |
| Conread position: | 5-370 |
| Cow position: | chr27:536693-537056 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 7-361 |
| Cow position: | chr27:11470459-11470113 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 225, 25 |
| Conread position: | 7-367 |
| Cow position: | chr27:29797165-29796811 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr27:526838-526483 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr27:1030625-1030982 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr27:2001773-2001416 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 221, 25 |
| Conread position: | 7-370 |
| Cow position: | chr27:11605957-11606314 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr27:13422235-13422592 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 7-370 |
| Cow position: | chr27:29035453-29035810 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 171, 25 |
| Conread position: | 15-361 |
| Cow position: | chr27:15349553-15349216 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 206, 18 |
| Conread position: | 15-370 |
| Cow position: | chr27:724465-724116 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:1481814-1481465 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:1655020-1654671 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:8743182-8743531 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 213, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:12007069-12006720 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:12147813-12147464 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:15312448-15312797 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:17403146-17403495 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:22796738-22797087 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:23080007-23079658 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-370 |
| Cow position: | chr27:23894255-23893906 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 163, 16 |
| Conread position: | 15-370 |
| Cow position: | chr27:29446186-29446533 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-371 |
| Cow position: | chr27:29373985-29374335 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 15-377 |
| Cow position: | chr27:10590425-10590067 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 163, 17 |
| Conread position: | 17-370 |
| Cow position: | chr27:344014-344358 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 215, 15 |
| Conread position: | 30-361 |
| Cow position: | chr27:8942432-8942105 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 31-366 |
| Cow position: | chr27:9262364-9262699 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 35-370 |
| Cow position: | chr27:17923819-17923481 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 36-358 |
| Cow position: | chr27:13317698-13317378 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 196, 19 |
| Conread position: | 36-370 |
| Cow position: | chr27:12005777-12006109 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 142, 18 |
| Conread position: | 36-370 |
| Cow position: | chr27:15032988-15033320 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 18 |
| Conread position: | 37-358 |
| Cow position: | chr27:16117256-16117578 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 191, 17 |
| Conread position: | 74-370 |
| Cow position: | chr27:25800344-25800639 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 160, 27 |
| Conread position: | 81-363 |
| Cow position: | chr27:17820169-17819885 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 151, 42 |
| Conread position: | 85-362 |
| Cow position: | chr27:19286926-19286647 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 102-370 |
| Cow position: | chr27:23074281-23074550 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 106-364 |
| Cow position: | chr27:12277946-12277683 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 125, 15 |
| Conread position: | 109-363 |
| Cow position: | chr27:5424047-5423791 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 110-370 |
| Cow position: | chr27:3988943-3989207 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 122, 75 |
| Conread position: | 111-366 |
| Cow position: | chr27:12751365-12751106 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 111-367 |
| Cow position: | chr27:2332336-2332075 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 111-367 |
| Cow position: | chr27:4881944-4882204 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 111-367 |
| Cow position: | chr27:13901958-13901698 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 14 |
| Conread position: | 111-370 |
| Cow position: | chr27:1294082-1293819 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 111-370 |
| Cow position: | chr27:3231705-3231966 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 17 |
| Conread position: | 111-370 |
| Cow position: | chr27:26545588-26545327 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 14 |
| Conread position: | 113-370 |
| Cow position: | chr27:16030565-16030825 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 115-363 |
| Cow position: | chr27:27019763-27019518 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 120, 10 |
| Conread position: | 115-370 |
| Cow position: | chr27:8201767-8201508 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 115-370 |
| Cow position: | chr27:25970850-25971105 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 117, 49 |
| Conread position: | 116-361 |
| Cow position: | chr27:14381266-14381015 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 9 |
| Conread position: | 116-370 |
| Cow position: | chr27:26598216-26598478 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 112, 7 |
| Conread position: | 121-370 |
| Cow position: | chr27:20000988-20001244 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 42 |
| Conread position: | 122-370 |
| Cow position: | chr27:1521505-1521246 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 122-370 |
| Cow position: | chr27:12097940-12098191 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 122-370 |
| Cow position: | chr27:15100465-15100211 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 6, 41 |
| Conread position: | 122-385 |
| Cow position: | chr27:19607303-19607032 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 124-361 |
| Cow position: | chr27:26087570-26087812 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 124-370 |
| Cow position: | chr27:27527859-27527608 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 67 |
| Conread position: | 125-367 |
| Cow position: | chr27:28907414-28907660 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 134-360 |
| Cow position: | chr27:16823164-16823391 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 98, 51 |
| Conread position: | 134-370 |
| Cow position: | chr27:1502306-1502065 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 134-370 |
| Cow position: | chr27:3650295-3650053 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 134-370 |
| Cow position: | chr27:8202189-8202428 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 26 |
| Conread position: | 134-370 |
| Cow position: | chr27:8959204-8959445 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 134-370 |
| Cow position: | chr27:10579756-10579515 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 137-370 |
| Cow position: | chr27:11651906-11651668 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 171-370 |
| Cow position: | chr27:3340149-3340354 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 171-370 |
| Cow position: | chr27:4769098-4768892 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 7, 133 |
Show alignments to all cow chromosomes.