Cow genome map

Conread name: Lng1-LNG010018E09

Conread position: 6-370
Cow position: chr28:7595665-7596029 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 231
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 21

Conread position: 6-370
Cow position: chr28:19186199-19185841 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 172, 26

Conread position: 7-370
Cow position: chr28:332423-332066 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr28:22582756-22582399 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 221, 25

Conread position: 7-370
Cow position: chr28:22736049-22735692 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr28:25829370-25829013 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 171, 25

Conread position: 12-363
Cow position: chr28:21854110-21854466 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 15

Conread position: 13-359
Cow position: chr28:786629-786287 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 223
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 163, 16

Conread position: 15-361
Cow position: chr28:15272547-15272884 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 218, 12

Conread position: 15-366
Cow position: chr28:5311383-5311728 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 236
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 163, 17

Conread position: 15-367
Cow position: chr28:34753927-34754273 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:481743-482092 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:1199162-1198813 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:2615857-2616206 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:6534830-6535179 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 163, 16

Conread position: 15-370
Cow position: chr28:7888118-7888467 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:9182835-9182487 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 213, 17

Conread position: 15-370
Cow position: chr28:9710187-9710536 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:12701834-12701485 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:24592477-24592128 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:24993454-24993105 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:25683242-25683591 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:27478734-27478386 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:27938787-27938438 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 163, 16

Conread position: 15-370
Cow position: chr28:28933996-28934345 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:29044336-29043987 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:29222320-29222668 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 236
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:29683204-29682855 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:30250093-30249744 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 171, 17

Conread position: 15-370
Cow position: chr28:32589666-32589317 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 243
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr28:34731698-34731349 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 232
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 213, 17

Conread position: 17-361
Cow position: chr28:11356214-11356560 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 219
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 215, 37

Conread position: 17-364
Cow position: chr28:12080963-12081304 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 79, 15

Conread position: 17-370
Cow position: chr28:7005993-7005646 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 161, 15

Conread position: 17-370
Cow position: chr28:18516180-18516527 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 161, 15

Conread position: 17-370
Cow position: chr28:26781793-26781446 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 230
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 215, 15

Conread position: 19-370
Cow position: chr28:29035688-29036033 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 216, 16

Conread position: 30-363
Cow position: chr28:26796680-26796349 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 199, 20

Conread position: 31-363
Cow position: chr28:33134580-33134248 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 206, 16

Conread position: 35-356
Cow position: chr28:28076767-28077092 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 203
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 186, 19

Conread position: 36-367
Cow position: chr28:29824135-29823806 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 142, 18

Conread position: 36-370
Cow position: chr28:19961584-19961245 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 18

Conread position: 36-370
Cow position: chr28:23477676-23478008 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 142, 18

Conread position: 36-370
Cow position: chr28:28471967-28471635 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 18

Conread position: 36-370
Cow position: chr28:30098826-30098494 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 218
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 11

Conread position: 39-362
Cow position: chr28:4458564-4458242 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 206
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 197, 15

Conread position: 52-363
Cow position: chr28:25767909-25767599 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 203
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 183, 43

Conread position: 52-370
Cow position: chr28:1943362-1943678 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 176, 55

Conread position: 54-363
Cow position: chr28:9340726-9341033 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 38

Conread position: 86-363
Cow position: chr28:28552299-28552005 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 146, 93

Conread position: 87-363
Cow position: chr28:12694623-12694349 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 145, 80

Conread position: 89-355
Cow position: chr28:20013976-20013709 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 149, 96

Conread position: 108-370
Cow position: chr28:15429545-15429280 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 16

Conread position: 109-382
Cow position: chr28:16684507-16684230 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 15

Conread position: 110-361
Cow position: chr28:13865427-13865177 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 21

Conread position: 110-370
Cow position: chr28:28724100-28723836 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 122, 18

Conread position: 111-367
Cow position: chr28:5747825-5748085 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 14

Conread position: 111-367
Cow position: chr28:6047672-6047412 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 14

Conread position: 111-367
Cow position: chr28:13889114-13889374 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 14

Conread position: 111-367
Cow position: chr28:29726797-29726536 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 171
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 74

Conread position: 111-370
Cow position: chr28:18144855-18145117 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 123, 12

Conread position: 111-370
Cow position: chr28:24603806-24603544 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 121, 14

Conread position: 116-361
Cow position: chr28:329936-330183 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 12

Conread position: 116-367
Cow position: chr28:15712883-15712628 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 119, 9

Conread position: 116-370
Cow position: chr28:15410477-15410218 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 106, 9

Conread position: 116-370
Cow position: chr28:15965718-15965976 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 18

Conread position: 116-370
Cow position: chr28:18559100-18559358 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 9, 18

Conread position: 116-370
Cow position: chr28:34082394-34082652 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 115, 9

Conread position: 117-370
Cow position: chr28:5768822-5768565 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 8

Conread position: 121-370
Cow position: chr28:20966788-20967051 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 190

Conread position: 122-370
Cow position: chr28:1957235-1956981 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr28:12117368-12117622 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr28:16182220-16181966 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr28:16598019-16597765 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 45

Conread position: 124-361
Cow position: chr28:3024311-3024553 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 70

Conread position: 125-370
Cow position: chr28:12406309-12406559 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 60

Conread position: 125-370
Cow position: chr28:12651086-12650834 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 53, 37

Conread position: 127-361
Cow position: chr28:21354835-21354596 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 74

Conread position: 128-361
Cow position: chr28:11451864-11452103 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 57

Conread position: 134-370
Cow position: chr28:445258-445017 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr28:2422568-2422327 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr28:5637910-5637668 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr28:6484635-6484876 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 39

Conread position: 134-370
Cow position: chr28:7906688-7906929 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr28:10870948-10870707 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr28:13536535-13536294 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr28:15107721-15107962 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr28:23685897-23685656 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr28:34579799-34580040 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr28:34581494-34581735 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 32

Conread position: 134-429
Cow position: chr28:1575646-1575945 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 27

Conread position: 139-370
Cow position: chr28:3001012-3001248 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 52

Conread position: 140-370
Cow position: chr28:2645566-2645331 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 92, 54

Conread position: 145-361
Cow position: chr28:12165657-12165877 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 22

Show alignments to all cow chromosomes.