Cow genome map

Conread name: Lng1-LNG010018E09

Conread position: 7-366
Cow position: chr29:9641867-9641516 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 171, 25

Conread position: 7-367
Cow position: chr29:16042615-16042261 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 217, 25

Conread position: 7-370
Cow position: chr29:1479396-1479040 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 221, 25

Conread position: 7-370
Cow position: chr29:5425912-5426265 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr29:13924024-13923667 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr29:15570480-15570123 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 7-370
Cow position: chr29:35735674-35736032 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 241
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 171, 25

Conread position: 7-395
Cow position: chr29:13128204-13128588 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 259
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 171, 25

Conread position: 15-361
Cow position: chr29:20014350-20014690 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 15-362
Cow position: chr29:10145539-10145880 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 231
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-367
Cow position: chr29:31093624-31093970 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:526899-527248 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:606710-607059 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:727667-727318 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:2402624-2402275 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:4611298-4610950 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 213, 17

Conread position: 15-370
Cow position: chr29:11118774-11119123 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:15755229-15755578 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:15767688-15768037 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:15965616-15965965 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:21227913-21227564 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 213, 17

Conread position: 15-370
Cow position: chr29:32292529-32292183 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:32329322-32329671 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:38271945-38271592 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:39048038-39047689 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 163, 17

Conread position: 15-370
Cow position: chr29:39213912-39214261 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 171, 17

Conread position: 15-395
Cow position: chr29:10031715-10032095 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 259
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 17

Conread position: 15-395
Cow position: chr29:18011509-18011134 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 253
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 163, 17

Conread position: 15-395
Cow position: chr29:32298662-32298286 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 163, 17

Conread position: 17-370
Cow position: chr29:406561-406906 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 228
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 204, 15

Conread position: 17-370
Cow position: chr29:2401290-2400943 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 161, 15

Conread position: 28-363
Cow position: chr29:32644611-32644274 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 214
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 26

Conread position: 35-370
Cow position: chr29:13634637-13634975 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 217
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 19

Conread position: 36-367
Cow position: chr29:8588816-8589145 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 217
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 196, 20

Conread position: 36-370
Cow position: chr29:686503-686835 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 196, 10

Conread position: 36-370
Cow position: chr29:16184858-16185190 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 142, 18

Conread position: 36-370
Cow position: chr29:27702996-27702666 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 142, 18

Conread position: 36-370
Cow position: chr29:32963228-32962896 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 216
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 69, 18

Conread position: 36-370
Cow position: chr29:35077051-35076719 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 142, 18

Conread position: 38-370
Cow position: chr29:7427224-7427552 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 140, 16

Conread position: 40-362
Cow position: chr29:5310832-5311161 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 40, 128

Conread position: 64-360
Cow position: chr29:13058602-13058302 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 65

Conread position: 100-370
Cow position: chr29:15944202-15943929 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 132, 25

Conread position: 109-361
Cow position: chr29:1956468-1956725 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 14

Conread position: 109-370
Cow position: chr29:18072548-18072285 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 12

Conread position: 109-370
Cow position: chr29:38247129-38247397 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 15

Conread position: 111-363
Cow position: chr29:19251885-19251628 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 83

Conread position: 111-367
Cow position: chr29:2103693-2103433 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 14

Conread position: 111-367
Cow position: chr29:10819863-10820123 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 110, 14

Conread position: 111-370
Cow position: chr29:5241247-5240984 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 121, 14

Conread position: 111-370
Cow position: chr29:19514486-19514750 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 55

Conread position: 111-370
Cow position: chr29:24728448-24728712 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 55

Conread position: 111-370
Cow position: chr29:31185227-31184965 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 14

Conread position: 111-370
Cow position: chr29:40498028-40498291 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 14

Conread position: 111-370
Cow position: chr29:45208349-45208088 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 14

Conread position: 111-371
Cow position: chr29:2837439-2837703 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 14

Conread position: 113-370
Cow position: chr29:32732951-32732687 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 15

Conread position: 116-360
Cow position: chr29:35738890-35739134 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 121, 9

Conread position: 116-360
Cow position: chr29:39075589-39075837 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 9

Conread position: 116-361
Cow position: chr29:35434484-35434235 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 116, 9

Conread position: 116-370
Cow position: chr29:2521193-2520935 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 172
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 9

Conread position: 116-370
Cow position: chr29:9078957-9079215 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 9

Conread position: 116-370
Cow position: chr29:19857304-19857046 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 7

Conread position: 119-370
Cow position: chr29:2744661-2744915 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 171
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 112, 6

Conread position: 122-361
Cow position: chr29:21231239-21231484 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 6, 40

Conread position: 122-361
Cow position: chr29:32516336-32516091 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 5, 45

Conread position: 122-370
Cow position: chr29:1743342-1743088 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr29:19524298-19524551 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr29:19891405-19891151 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 6, 45

Conread position: 122-370
Cow position: chr29:31765883-31765628 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 6, 182

Conread position: 124-361
Cow position: chr29:4875297-4875540 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 68

Conread position: 132-363
Cow position: chr29:36242936-36242699 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 134-367
Cow position: chr29:32176087-32175849 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 65

Conread position: 134-370
Cow position: chr29:292317-292076 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr29:2950496-2950255 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:13586034-13585793 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr29:13623544-13623785 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 39

Conread position: 134-370
Cow position: chr29:14569126-14568885 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr29:15251679-15251438 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:15698627-15698868 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:16065539-16065298 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr29:17458324-17458565 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:20075412-20075171 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:22341342-22341101 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:24982741-24982982 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 32

Conread position: 134-370
Cow position: chr29:32378401-32378160 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:32560187-32560428 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:40157574-40157333 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 27

Conread position: 134-370
Cow position: chr29:40295137-40294896 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 44, 27

Conread position: 139-370
Cow position: chr29:37617747-37617511 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 46

Conread position: 145-370
Cow position: chr29:2461980-2461745 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 146-370
Cow position: chr29:34780167-34780396 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 20

Conread position: 171-370
Cow position: chr29:21429069-21429275 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 171-370
Cow position: chr29:42255184-42255390 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 173-370
Cow position: chr29:5786289-5786083 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 185-370
Cow position: chr29:13876853-13876662 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.