Cow genome map


           Conread name:
           Lng1-LNG010018E09
        

               Conread position:
               7-366
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-367
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               217, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               221, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               7-395
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               171, 25
               

               Conread position:
               15-361
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-362
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-367
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               213, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-370
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               171, 17
               

               Conread position:
               15-395
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-395
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               15-395
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               163, 17
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               204, 15
               

               Conread position:
               17-370
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               161, 15
               

               Conread position:
               28-363
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 26
               

               Conread position:
               35-370
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               82, 19
               

               Conread position:
               36-367
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               196, 20
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               196, 10
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               142, 18
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               142, 18
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               69, 18
               

               Conread position:
               36-370
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               142, 18
               

               Conread position:
               38-370
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               140, 16
               

               Conread position:
               40-362
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               40, 128
               

               Conread position:
               64-360
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               100-370
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               132, 25
               

               Conread position:
               109-361
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               122, 14
               

               Conread position:
               109-370
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               109-370
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               111-363
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               121, 83
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-367
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               121, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 55
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-370
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               111-371
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 14
               

               Conread position:
               113-370
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               119, 15
               

               Conread position:
               116-360
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               121, 9
               

               Conread position:
               116-360
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               116-361
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               116, 9
               

               Conread position:
               116-370
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               119-370
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               112, 6
               

               Conread position:
               122-361
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               6, 40
               

               Conread position:
               122-361
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               5, 45
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               6, 45
               

               Conread position:
               122-370
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               6, 182
               

               Conread position:
               124-361
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               132-363
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               134-367
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               94, 39
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               134-370
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               139-370
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               93, 46
               

               Conread position:
               145-370
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               146-370
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               171-370
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               173-370
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               185-370
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               43, 0
               
Show alignments to all cow chromosomes.