Cow genome map
| Conread name: | Lng1-LNG010020C12 |
| Conread position: | 320-803 |
| Cow position: | chrX:28552751-28553231 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 324-725 |
| Cow position: | chrX:6362035-6361636 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 331-596 |
| Cow position: | chrX:42450710-42450445 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 12, 131 |
| Conread position: | 331-803 |
| Cow position: | chrX:2537670-2537204 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 126 |
| Conread position: | 333-798 |
| Cow position: | chrX:21585769-21586225 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 395, 58 |
| Conread position: | 349-803 |
| Cow position: | chrX:25041662-25041219 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 40 |
| Conread position: | 356-803 |
| Cow position: | chrX:12656015-12655567 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 229, 96 |
| Conread position: | 358-803 |
| Cow position: | chrX:14050815-14051261 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 358-803 |
| Cow position: | chrX:30190640-30190200 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 360-803 |
| Cow position: | chrX:3086161-3085719 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 360-803 |
| Cow position: | chrX:5862134-5862577 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 360-803 |
| Cow position: | chrX:13032688-13032244 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 360-803 |
| Cow position: | chrX:13077952-13077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 225, 46 |
| Conread position: | 360-803 |
| Cow position: | chrX:13098526-13098084 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 225, 46 |
| Conread position: | 360-803 |
| Cow position: | chrX:16364388-16363943 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 360-803 |
| Cow position: | chrX:28522947-28522504 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 360-803 |
| Cow position: | chrX:28759886-28759442 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 360-803 |
| Cow position: | chrX:29174860-29174417 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 360-804 |
| Cow position: | chrX:6576434-6576878 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 361-798 |
| Cow position: | chrX:29795335-29794900 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 90 |
| Conread position: | 361-803 |
| Cow position: | chrX:31371738-31372168 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 7 |
| Conread position: | 362-803 |
| Cow position: | chrX:20317339-20316897 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 362-803 |
| Cow position: | chrX:21791475-21791922 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 368-724 |
| Cow position: | chrX:6284419-6284067 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 403-652 |
| Cow position: | chrX:28548146-28548393 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 408-803 |
| Cow position: | chrX:22584136-22583741 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 408-834 |
| Cow position: | chrX:35015695-35016120 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 409-801 |
| Cow position: | chrX:28652275-28651892 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 149, 34 |
| Conread position: | 414-803 |
| Cow position: | chrX:1832666-1833055 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 314, 38 |
| Conread position: | 424-803 |
| Cow position: | chrX:3422639-3422260 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 161, 27 |
| Conread position: | 437-803 |
| Cow position: | chrX:31034548-31034908 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 23 |
| Conread position: | 504-803 |
| Cow position: | chrX:24088273-24088583 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 81, 87 |
| Conread position: | 506-704 |
| Cow position: | chrX:17670042-17669848 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 506-789 |
| Cow position: | chrX:16018209-16017926 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 167 |
| Conread position: | 625-801 |
| Cow position: | chrX:29283764-29283943 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 648-798 |
| Cow position: | chrX:22813478-22813631 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.