Cow genome map
Conread name: | Lng1-LNG010021B07 |
Conread position: | 259-731 |
Cow position: | chr10:32650259-32650734 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 59 |
Conread position: | 263-710 |
Cow position: | chr10:20383988-20383564 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 297 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 117, 68 |
Conread position: | 263-713 |
Cow position: | chr10:39041782-39041322 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 38 |
Conread position: | 263-719 |
Cow position: | chr10:123841-124299 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 39 |
Conread position: | 263-719 |
Cow position: | chr10:37769349-37769812 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 68 |
Conread position: | 263-719 |
Cow position: | chr10:38538967-38538508 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 312 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr10:1375063-1375536 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 46 |
Conread position: | 263-731 |
Cow position: | chr10:8289492-8289984 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr10:19143816-19143337 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 39 |
Conread position: | 263-731 |
Cow position: | chr10:19511137-19511607 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr10:21486442-21486916 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 65 |
Conread position: | 269-725 |
Cow position: | chr10:21075909-21076358 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 308 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 55, 41 |
Conread position: | 276-731 |
Cow position: | chr10:28116892-28116425 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 317 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 40, 25 |
Conread position: | 278-725 |
Cow position: | chr10:42747645-42748095 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 178 |
Conread position: | 279-505 |
Cow position: | chr10:28932825-28932596 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 157 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 14, 43 |
Conread position: | 279-507 |
Cow position: | chr10:2075686-2075476 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 279-725 |
Cow position: | chr10:42109277-42109725 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 142 |
Conread position: | 282-534 |
Cow position: | chr10:183089-183345 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 188 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 8, 215 |
Conread position: | 282-620 |
Cow position: | chr10:14886295-14885966 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 247 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 23, 127 |
Conread position: | 282-646 |
Cow position: | chr10:58596065-58596414 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 20 |
Conread position: | 284-508 |
Cow position: | chr10:14951273-14951494 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 21, 60 |
Conread position: | 284-592 |
Cow position: | chr10:19715496-19715188 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 214 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 42, 14 |
Conread position: | 284-606 |
Cow position: | chr10:58378008-58377700 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 57 |
Conread position: | 284-664 |
Cow position: | chr10:34318705-34318339 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 76 |
Conread position: | 284-693 |
Cow position: | chr10:24299305-24298888 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 108 |
Conread position: | 284-719 |
Cow position: | chr10:4499260-4499678 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 125 |
Conread position: | 284-725 |
Cow position: | chr10:41352207-41351756 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 325 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 26, 160 |
Conread position: | 284-731 |
Cow position: | chr10:7283131-7282684 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 284-731 |
Cow position: | chr10:22100791-22101233 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 284-731 |
Cow position: | chr10:37060478-37060925 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 284-731 |
Cow position: | chr10:57990415-57989962 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 284-731 |
Cow position: | chr10:62409303-62408854 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 20 |
Conread position: | 285-719 |
Cow position: | chr10:25497914-25498341 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 374, 23 |
Conread position: | 302-731 |
Cow position: | chr10:4192648-4192216 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 286 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 14, 240 |
Conread position: | 303-719 |
Cow position: | chr10:32063726-32064135 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 80 |
Conread position: | 305-725 |
Cow position: | chr10:38846952-38847364 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 49 |
Conread position: | 324-731 |
Cow position: | chr10:21401074-21400670 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 273 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 14, 38 |
Conread position: | 324-731 |
Cow position: | chr10:41157047-41157449 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 273 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 14, 190 |
Conread position: | 325-731 |
Cow position: | chr10:14859578-14859977 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 324, 155 |
Conread position: | 330-732 |
Cow position: | chr10:41566709-41567109 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 266 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 8, 41 |
Conread position: | 331-719 |
Cow position: | chr10:60489271-60489649 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 103 |
Conread position: | 333-509 |
Cow position: | chr10:2123509-2123333 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 123 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 336-719 |
Cow position: | chr10:46190991-46191357 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 274 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 28, 162 |
Conread position: | 336-731 |
Cow position: | chr10:29847006-29846608 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 175 |
Conread position: | 336-731 |
Cow position: | chr10:38345758-38345361 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 174 |
Conread position: | 338-731 |
Cow position: | chr10:10581280-10581674 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 49 |
Conread position: | 341-591 |
Cow position: | chr10:21466865-21467112 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 171 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 341-731 |
Cow position: | chr10:281010-280619 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 255 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 308, 169 |
Conread position: | 341-731 |
Cow position: | chr10:51952992-51952604 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 260 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 341-734 |
Cow position: | chr10:14803445-14803839 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 315, 148 |
Conread position: | 349-731 |
Cow position: | chr10:25565624-25565244 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 262 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 13, 133 |
Conread position: | 355-716 |
Cow position: | chr10:55092735-55093097 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 243 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 146, 31 |
Conread position: | 355-731 |
Cow position: | chr10:276218-276595 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 11 |
Conread position: | 358-731 |
Cow position: | chr10:62216234-62216608 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 254 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 297, 146 |
Conread position: | 359-719 |
Cow position: | chr10:29695875-29696226 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 242 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 384-719 |
Cow position: | chr10:34685549-34685883 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 235 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 275, 126 |
Conread position: | 384-719 |
Cow position: | chr10:62777995-62778335 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 127 |
Show alignments to all cow chromosomes.