Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               263-707
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-754
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               268-719
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 36
               

               Conread position:
               270-537
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 267
               

               Conread position:
               280-616
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 188
               

               Conread position:
               281-505
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               281-570
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               281-689
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               281-715
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               281-725
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               281-731
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               281-731
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               282-574
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 198
               

               Conread position:
               282-620
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               283-734
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               302
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               284-524
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               54, 29
               

               Conread position:
               284-546
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               284-581
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               284-593
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               284-606
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               28, 217
               

               Conread position:
               284-644
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               284-654
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               375, 20
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               284-725
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 75
               

               Conread position:
               284-727
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               285-719
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               295
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               373, 23
               

               Conread position:
               286-719
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 132
               

               Conread position:
               288-592
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               305-559
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               36, 85
               

               Conread position:
               308-731
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 232
               

               Conread position:
               312-719
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 7
               

               Conread position:
               324-716
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 194
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               329-725
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               258, 5
               

               Conread position:
               330-731
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               336-700
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               47, 169
               

               Conread position:
               336-704
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 178
               

               Conread position:
               336-716
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 18
               

               Conread position:
               336-716
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               245, 174
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               154, 268
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               199, 144
               

               Conread position:
               340-632
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               255, 170
               

               Conread position:
               341-719
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               317, 169
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               53, 152
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               315, 139
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               89, 28
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 14
               

               Conread position:
               342-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               350-719
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 16
               

               Conread position:
               351-719
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               310, 11
               

               Conread position:
               353-725
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               296, 157
               

               Conread position:
               355-647
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               126, 7
               

               Conread position:
               359-731
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 151
               

               Conread position:
               372-654
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               372-700
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               182, 57
               

               Conread position:
               372-731
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 111
               

               Conread position:
               373-719
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               286, 137
               

               Conread position:
               383-719
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 79
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               97, 115
               

               Conread position:
               391-719
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               268, 114
               

               Conread position:
               394-694
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               111, 51
               

               Conread position:
               394-719
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 118
               

               Conread position:
               403-664
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               206, 75
               

               Conread position:
               514-716
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 49
               
Show alignments to all cow chromosomes.