Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 259-638 |
| Cow position: | chr13:15542689-15543073 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 259-719 |
| Cow position: | chr13:9043755-9044204 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 314 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 263-700 |
| Cow position: | chr13:31560416-31560860 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 151 |
| Conread position: | 263-716 |
| Cow position: | chr13:4940312-4940777 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 257 |
| Conread position: | 263-719 |
| Cow position: | chr13:30302302-30302759 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 263-719 |
| Cow position: | chr13:33337092-33336634 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 263-725 |
| Cow position: | chr13:46733106-46732653 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 69 |
| Conread position: | 263-731 |
| Cow position: | chr13:31613108-31612630 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr13:34043135-34042659 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr13:35756462-35756946 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 263-734 |
| Cow position: | chr13:3655080-3654602 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 278-725 |
| Cow position: | chr13:15080920-15080504 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 192 |
| Conread position: | 282-700 |
| Cow position: | chr13:30140235-30140666 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 179 |
| Conread position: | 284-475 |
| Cow position: | chr13:33279099-33278894 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 284-536 |
| Cow position: | chr13:47859590-47859826 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 109, 60 |
| Conread position: | 284-551 |
| Cow position: | chr13:41606970-41607226 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 284-730 |
| Cow position: | chr13:4481735-4482175 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 285-707 |
| Cow position: | chr13:2305754-2306184 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 26, 190 |
| Conread position: | 285-731 |
| Cow position: | chr13:32544207-32544646 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 285-731 |
| Cow position: | chr13:33825475-33825024 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 244, 23 |
| Conread position: | 285-742 |
| Cow position: | chr13:3276421-3276871 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 23 |
| Conread position: | 305-719 |
| Cow position: | chr13:6668849-6668430 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 202 |
| Conread position: | 324-731 |
| Cow position: | chr13:21840901-21840489 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 189 |
| Conread position: | 333-716 |
| Cow position: | chr13:34326375-34325987 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 7, 182 |
| Conread position: | 336-719 |
| Cow position: | chr13:15521205-15520820 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 174 |
| Conread position: | 336-731 |
| Cow position: | chr13:15925074-15924679 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 174 |
| Conread position: | 338-666 |
| Cow position: | chr13:48356644-48356957 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 13, 133 |
| Conread position: | 341-592 |
| Cow position: | chr13:53834086-53834334 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 341-647 |
| Cow position: | chr13:34868085-34868385 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 141 |
| Conread position: | 341-716 |
| Cow position: | chr13:50108781-50109152 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 308, 70 |
| Conread position: | 341-731 |
| Cow position: | chr13:4872392-4872782 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 32, 164 |
| Conread position: | 341-731 |
| Cow position: | chr13:30245420-30245028 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 169 |
| Conread position: | 341-731 |
| Cow position: | chr13:31734758-31734376 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 315, 138 |
| Conread position: | 341-731 |
| Cow position: | chr13:32986730-32986344 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 278, 83 |
| Conread position: | 343-728 |
| Cow position: | chr13:20543040-20542665 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 359-716 |
| Cow position: | chr13:62328247-62327893 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 195, 121 |
| Conread position: | 363-731 |
| Cow position: | chr13:54283931-54284286 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 140, 81 |
| Conread position: | 384-700 |
| Cow position: | chr13:34143302-34142983 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 101, 154 |
| Conread position: | 384-719 |
| Cow position: | chr13:33928189-33927869 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 275, 29 |
| Conread position: | 384-731 |
| Cow position: | chr13:2909087-2908745 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 275, 126 |
| Conread position: | 402-693 |
| Cow position: | chr13:13046445-13046155 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 179, 108 |
| Conread position: | 403-731 |
| Cow position: | chr13:3058617-3058287 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 214, 101 |
| Conread position: | 436-716 |
| Cow position: | chr13:3338257-3338536 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 165, 55 |
Show alignments to all cow chromosomes.