Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               262-719
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 260
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-732
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 256
               

               Conread position:
               265-545
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               135, 32
               

               Conread position:
               281-646
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               281-720
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               306
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               281-731
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               283-682
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 106
               

               Conread position:
               284-575
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               284-592
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               28, 66
               

               Conread position:
               284-704
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               284-706
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 231
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 94
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 23
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 122
               

               Conread position:
               297-725
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 33
               

               Conread position:
               303-725
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               35, 61
               

               Conread position:
               305-610
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               311-731
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 140
               

               Conread position:
               312-509
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 139
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 188
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               275
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               331-690
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 53
               

               Conread position:
               331-696
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 53
               

               Conread position:
               335-731
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 33
               

               Conread position:
               336-716
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               41, 35
               

               Conread position:
               336-716
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               29, 177
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               268, 174
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 117
               

               Conread position:
               340-725
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 198
               

               Conread position:
               341-572
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-593
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               341-719
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 38
               

               Conread position:
               341-719
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 175
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 169
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 32
               

               Conread position:
               341-788
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 170
               

               Conread position:
               344-719
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 44
               

               Conread position:
               349-725
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 80
               

               Conread position:
               350-706
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               304, 93
               

               Conread position:
               351-719
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               225, 142
               

               Conread position:
               372-590
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               372-716
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               245, 138
               

               Conread position:
               373-638
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               373-725
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               285, 137
               

               Conread position:
               384-593
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               186, 126
               

               Conread position:
               384-692
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               265, 149
               

               Conread position:
               389-719
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               89, 18
               

               Conread position:
               391-719
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               23, 149
               

               Conread position:
               405-731
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               254, 103
               

               Conread position:
               444-731
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               231, 70
               

               Conread position:
               548-704
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               110, 101
               
Show alignments to all cow chromosomes.