Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 262-719 |
| Cow position: | chr14:35928282-35928745 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 260 |
| Conread position: | 263-719 |
| Cow position: | chr14:7471479-7471944 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 45 |
| Conread position: | 263-719 |
| Cow position: | chr14:43552525-43552990 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 263-731 |
| Cow position: | chr14:13302131-13302612 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr14:16274194-16273714 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 263-731 |
| Cow position: | chr14:20781562-20782038 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr14:22032575-22032104 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-732 |
| Cow position: | chr14:11155050-11154572 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 256 |
| Conread position: | 265-545 |
| Cow position: | chr14:25439259-25438999 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 135, 32 |
| Conread position: | 281-646 |
| Cow position: | chr14:44675541-44675893 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 281-720 |
| Cow position: | chr14:14422876-14422447 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 306 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 281-731 |
| Cow position: | chr14:37223027-37223484 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 283-682 |
| Cow position: | chr14:31607789-31607387 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 284-575 |
| Cow position: | chr14:38145778-38146060 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 284-592 |
| Cow position: | chr14:31886613-31886910 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 66 |
| Conread position: | 284-704 |
| Cow position: | chr14:41755001-41755416 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 34 |
| Conread position: | 284-706 |
| Cow position: | chr14:11467729-11468161 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 284-716 |
| Cow position: | chr14:47921154-47921573 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 284-731 |
| Cow position: | chr14:5528195-5528643 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-731 |
| Cow position: | chr14:17001919-17001473 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-731 |
| Cow position: | chr14:19329138-19328687 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 231 |
| Conread position: | 284-731 |
| Cow position: | chr14:44580079-44580503 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 94 |
| Conread position: | 284-731 |
| Cow position: | chr14:48255184-48254729 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 285-731 |
| Cow position: | chr14:17684532-17684977 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 285-731 |
| Cow position: | chr14:23691088-23690643 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 23 |
| Conread position: | 285-731 |
| Cow position: | chr14:28994729-28994273 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 122 |
| Conread position: | 297-725 |
| Cow position: | chr14:40170532-40170108 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 303-725 |
| Cow position: | chr14:44616451-44616861 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 286 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 35, 61 |
| Conread position: | 305-610 |
| Cow position: | chr14:44551212-44551511 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 311-731 |
| Cow position: | chr14:14309899-14309490 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 140 |
| Conread position: | 312-509 |
| Cow position: | chr14:46653745-46653944 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 139 |
| Conread position: | 324-731 |
| Cow position: | chr14:30585765-30585363 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 188 |
| Conread position: | 324-731 |
| Cow position: | chr14:45672872-45672463 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 331-690 |
| Cow position: | chr14:44780724-44780376 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 53 |
| Conread position: | 331-696 |
| Cow position: | chr14:44783064-44782710 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 53 |
| Conread position: | 335-731 |
| Cow position: | chr14:45850411-45850807 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 336-716 |
| Cow position: | chr14:44376624-44377002 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 336-716 |
| Cow position: | chr14:44856243-44855860 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 29, 177 |
| Conread position: | 336-719 |
| Cow position: | chr14:50109765-50110141 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 268, 174 |
| Conread position: | 336-731 |
| Cow position: | chr14:40338899-40339288 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 117 |
| Conread position: | 340-725 |
| Cow position: | chr14:22018591-22018974 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 198 |
| Conread position: | 341-572 |
| Cow position: | chr14:17241431-17241653 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-593 |
| Cow position: | chr14:50134106-50134349 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 341-719 |
| Cow position: | chr14:35387935-35387562 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 38 |
| Conread position: | 341-719 |
| Cow position: | chr14:44685237-44685618 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 175 |
| Conread position: | 341-731 |
| Cow position: | chr14:13272453-13272840 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 169 |
| Conread position: | 341-731 |
| Cow position: | chr14:17492261-17491875 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 341-788 |
| Cow position: | chr14:45160054-45160500 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 170 |
| Conread position: | 344-719 |
| Cow position: | chr14:38533102-38532725 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 349-725 |
| Cow position: | chr14:27993077-27992730 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 350-706 |
| Cow position: | chr14:23529793-23529453 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 304, 93 |
| Conread position: | 351-719 |
| Cow position: | chr14:44261890-44261519 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 225, 142 |
| Conread position: | 372-590 |
| Cow position: | chr14:2283209-2283424 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 372-716 |
| Cow position: | chr14:9044786-9045132 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 245, 138 |
| Conread position: | 373-638 |
| Cow position: | chr14:41085585-41085328 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 373-725 |
| Cow position: | chr14:48703829-48704176 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 285, 137 |
| Conread position: | 384-593 |
| Cow position: | chr14:1499986-1500193 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 186, 126 |
| Conread position: | 384-692 |
| Cow position: | chr14:36967491-36967799 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 265, 149 |
| Conread position: | 389-719 |
| Cow position: | chr14:45767248-45767576 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 89, 18 |
| Conread position: | 391-719 |
| Cow position: | chr14:13660752-13660419 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 405-731 |
| Cow position: | chr14:16920428-16920107 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 254, 103 |
| Conread position: | 444-731 |
| Cow position: | chr14:44421851-44422137 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 231, 70 |
| Conread position: | 548-704 |
| Cow position: | chr14:37414554-37414393 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 110, 101 |
Show alignments to all cow chromosomes.