Cow genome map

Conread name: Lng1-LNG010021B07

Conread position: 261-671
Cow position: chr16:27004144-27004540 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 272
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 53, 59

Conread position: 262-552
Cow position: chr16:5588960-5589251 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 229

Conread position: 263-651
Cow position: chr16:9776895-9777283 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 263-712
Cow position: chr16:408274-407816 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 256

Conread position: 263-731
Cow position: chr16:15565510-15565985 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 37

Conread position: 263-731
Cow position: chr16:25458716-25458236 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 281-719
Cow position: chr16:10437039-10437466 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 291
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 96

Conread position: 284-551
Cow position: chr16:5648026-5648290 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 27, 153

Conread position: 284-593
Cow position: chr16:42051563-42051261 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 95

Conread position: 284-642
Cow position: chr16:14422519-14422859 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 27

Conread position: 284-648
Cow position: chr16:29982053-29982417 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 197

Conread position: 284-680
Cow position: chr16:29031698-29032100 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 148

Conread position: 284-706
Cow position: chr16:44964833-44965265 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 189

Conread position: 284-715
Cow position: chr16:16687650-16688090 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 151

Conread position: 284-716
Cow position: chr16:2484354-2483918 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 284-716
Cow position: chr16:54647128-54647548 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 27

Conread position: 284-731
Cow position: chr16:25340759-25341204 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 39

Conread position: 284-731
Cow position: chr16:25440399-25440853 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 284-731
Cow position: chr16:28472313-28471859 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 284-731
Cow position: chr16:40297390-40296939 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 284-732
Cow position: chr16:55112073-55111610 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 315
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 20, 177

Conread position: 285-719
Cow position: chr16:20255514-20255086 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 51

Conread position: 285-726
Cow position: chr16:29676512-29676074 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 23

Conread position: 288-716
Cow position: chr16:51685235-51685656 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 221

Conread position: 303-513
Cow position: chr16:45568896-45569102 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 153

Conread position: 303-696
Cow position: chr16:19714033-19713647 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 331, 30

Conread position: 321-719
Cow position: chr16:31376403-31376034 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 13, 64

Conread position: 333-614
Cow position: chr16:15369278-15369548 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 62, 133

Conread position: 333-731
Cow position: chr16:1568610-1568219 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 274
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 38, 47

Conread position: 336-568
Cow position: chr16:14666948-14666719 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 174, 0

Conread position: 336-608
Cow position: chr16:9929396-9929666 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 157, 99

Conread position: 336-664
Cow position: chr16:32934993-32935300 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 10, 107

Conread position: 336-730
Cow position: chr16:24881847-24881456 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 174

Conread position: 336-730
Cow position: chr16:49236267-49235880 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 30

Conread position: 337-716
Cow position: chr16:14669135-14669513 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 250
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 161, 39

Conread position: 338-716
Cow position: chr16:23670739-23670373 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 340-693
Cow position: chr16:36232748-36232406 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 309, 40

Conread position: 341-647
Cow position: chr16:10376418-10376126 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 341-713
Cow position: chr16:31593061-31592687 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 301, 163

Conread position: 341-716
Cow position: chr16:24155580-24155220 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 36

Conread position: 341-719
Cow position: chr16:1430072-1430449 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 29

Conread position: 341-731
Cow position: chr16:31608-31984 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 258
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 318, 41

Conread position: 341-731
Cow position: chr16:25157366-25156984 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 39

Conread position: 344-731
Cow position: chr16:4303622-4303235 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 257
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 29

Conread position: 350-719
Cow position: chr16:42740558-42740195 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 12

Conread position: 356-704
Cow position: chr16:25152639-25152983 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 86

Conread position: 357-731
Cow position: chr16:26662619-26662984 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 255
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 292, 24

Conread position: 359-687
Cow position: chr16:11052036-11052360 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 293, 141

Conread position: 372-715
Cow position: chr16:5660743-5661081 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 284, 108

Conread position: 373-731
Cow position: chr16:7905520-7905880 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 286, 137

Conread position: 384-719
Cow position: chr16:6549633-6549299 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 275, 126

Conread position: 387-715
Cow position: chr16:47562587-47562906 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 53

Conread position: 398-730
Cow position: chr16:23982213-23982547 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 257, 112

Conread position: 406-716
Cow position: chr16:52815705-52815414 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 225
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 254, 62

Conread position: 406-731
Cow position: chr16:27734895-27734568 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 253, 104

Conread position: 564-694
Cow position: chr16:50875240-50875103 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.