Cow genome map
Conread name: | Lng1-LNG010021B07 |
Conread position: | 261-671 |
Cow position: | chr16:27004144-27004540 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 272 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 53, 59 |
Conread position: | 262-552 |
Cow position: | chr16:5588960-5589251 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 212 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 21, 229 |
Conread position: | 263-651 |
Cow position: | chr16:9776895-9777283 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-712 |
Cow position: | chr16:408274-407816 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 256 |
Conread position: | 263-731 |
Cow position: | chr16:15565510-15565985 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 37 |
Conread position: | 263-731 |
Cow position: | chr16:25458716-25458236 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 281-719 |
Cow position: | chr16:10437039-10437466 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 291 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 40, 96 |
Conread position: | 284-551 |
Cow position: | chr16:5648026-5648290 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 194 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 27, 153 |
Conread position: | 284-593 |
Cow position: | chr16:42051563-42051261 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 224 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 22, 95 |
Conread position: | 284-642 |
Cow position: | chr16:14422519-14422859 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 27 |
Conread position: | 284-648 |
Cow position: | chr16:29982053-29982417 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 258 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 20, 197 |
Conread position: | 284-680 |
Cow position: | chr16:29031698-29032100 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 148 |
Conread position: | 284-706 |
Cow position: | chr16:44964833-44965265 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 189 |
Conread position: | 284-715 |
Cow position: | chr16:16687650-16688090 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 151 |
Conread position: | 284-716 |
Cow position: | chr16:2484354-2483918 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 284-716 |
Cow position: | chr16:54647128-54647548 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 368, 27 |
Conread position: | 284-731 |
Cow position: | chr16:25340759-25341204 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 39 |
Conread position: | 284-731 |
Cow position: | chr16:25440399-25440853 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 284-731 |
Cow position: | chr16:28472313-28471859 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 20 |
Conread position: | 284-731 |
Cow position: | chr16:40297390-40296939 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 20 |
Conread position: | 284-732 |
Cow position: | chr16:55112073-55111610 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 315 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 20, 177 |
Conread position: | 285-719 |
Cow position: | chr16:20255514-20255086 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 51 |
Conread position: | 285-726 |
Cow position: | chr16:29676512-29676074 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 23 |
Conread position: | 288-716 |
Cow position: | chr16:51685235-51685656 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 221 |
Conread position: | 303-513 |
Cow position: | chr16:45568896-45569102 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 35, 153 |
Conread position: | 303-696 |
Cow position: | chr16:19714033-19713647 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 271 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 331, 30 |
Conread position: | 321-719 |
Cow position: | chr16:31376403-31376034 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 279 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 13, 64 |
Conread position: | 333-614 |
Cow position: | chr16:15369278-15369548 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 195 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 62, 133 |
Conread position: | 333-731 |
Cow position: | chr16:1568610-1568219 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 274 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 38, 47 |
Conread position: | 336-568 |
Cow position: | chr16:14666948-14666719 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 158 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 174, 0 |
Conread position: | 336-608 |
Cow position: | chr16:9929396-9929666 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 194 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 157, 99 |
Conread position: | 336-664 |
Cow position: | chr16:32934993-32935300 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 230 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 10, 107 |
Conread position: | 336-730 |
Cow position: | chr16:24881847-24881456 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 174 |
Conread position: | 336-730 |
Cow position: | chr16:49236267-49235880 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 30 |
Conread position: | 337-716 |
Cow position: | chr16:14669135-14669513 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 250 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 161, 39 |
Conread position: | 338-716 |
Cow position: | chr16:23670739-23670373 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 17 |
Conread position: | 340-693 |
Cow position: | chr16:36232748-36232406 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 249 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 309, 40 |
Conread position: | 341-647 |
Cow position: | chr16:10376418-10376126 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 201 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 341-713 |
Cow position: | chr16:31593061-31592687 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 163 |
Conread position: | 341-716 |
Cow position: | chr16:24155580-24155220 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 250 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 30, 36 |
Conread position: | 341-719 |
Cow position: | chr16:1430072-1430449 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 29 |
Conread position: | 341-731 |
Cow position: | chr16:31608-31984 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 258 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 318, 41 |
Conread position: | 341-731 |
Cow position: | chr16:25157366-25156984 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 312, 39 |
Conread position: | 344-731 |
Cow position: | chr16:4303622-4303235 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 257 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 21, 29 |
Conread position: | 350-719 |
Cow position: | chr16:42740558-42740195 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 12 |
Conread position: | 356-704 |
Cow position: | chr16:25152639-25152983 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 245 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 48, 86 |
Conread position: | 357-731 |
Cow position: | chr16:26662619-26662984 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 255 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 292, 24 |
Conread position: | 359-687 |
Cow position: | chr16:11052036-11052360 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 227 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 293, 141 |
Conread position: | 372-715 |
Cow position: | chr16:5660743-5661081 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 238 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 284, 108 |
Conread position: | 373-731 |
Cow position: | chr16:7905520-7905880 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 244 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 286, 137 |
Conread position: | 384-719 |
Cow position: | chr16:6549633-6549299 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 236 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 275, 126 |
Conread position: | 387-715 |
Cow position: | chr16:47562587-47562906 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 262, 53 |
Conread position: | 398-730 |
Cow position: | chr16:23982213-23982547 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 232 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 257, 112 |
Conread position: | 406-716 |
Cow position: | chr16:52815705-52815414 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 225 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 254, 62 |
Conread position: | 406-731 |
Cow position: | chr16:27734895-27734568 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 225 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 253, 104 |
Conread position: | 564-694 |
Cow position: | chr16:50875240-50875103 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Show alignments to all cow chromosomes.