Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 258-731 |
| Cow position: | chr18:28974360-28973882 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 258-731 |
| Cow position: | chr18:41841288-41840804 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 260-731 |
| Cow position: | chr18:36507872-36508354 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 262-571 |
| Cow position: | chr18:42245002-42244699 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 263-610 |
| Cow position: | chr18:14129837-14130189 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr18:32651543-32652016 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 263-731 |
| Cow position: | chr18:37504608-37505084 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-734 |
| Cow position: | chr18:51480386-51480861 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 269-731 |
| Cow position: | chr18:14415533-14415997 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 271-715 |
| Cow position: | chr18:16177052-16176608 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 281-704 |
| Cow position: | chr18:27838733-27838309 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 284-602 |
| Cow position: | chr18:35287823-35288137 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 284-715 |
| Cow position: | chr18:45958264-45958688 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 284-733 |
| Cow position: | chr18:25349608-25350062 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 310-501 |
| Cow position: | chr18:54268157-54268346 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 316-834 |
| Cow position: | chr18:54024752-54024248 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 336-545 |
| Cow position: | chr18:29236403-29236609 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 336-700 |
| Cow position: | chr18:32293397-32293761 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 36 |
| Conread position: | 336-731 |
| Cow position: | chr18:19352002-19352406 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 92, 207 |
| Conread position: | 337-716 |
| Cow position: | chr18:9187136-9186761 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 264, 43 |
| Conread position: | 338-719 |
| Cow position: | chr18:29945852-29946195 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 311, 20 |
| Conread position: | 341-716 |
| Cow position: | chr18:37586034-37585658 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 163 |
| Conread position: | 341-719 |
| Cow position: | chr18:16660368-16659996 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 323, 59 |
| Conread position: | 341-731 |
| Cow position: | chr18:16078334-16078720 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 315, 50 |
| Conread position: | 341-731 |
| Cow position: | chr18:47741647-47742039 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 169 |
| Conread position: | 341-731 |
| Cow position: | chr18:55089296-55088904 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 276, 169 |
| Conread position: | 342-731 |
| Cow position: | chr18:11275457-11275085 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 308, 5 |
| Conread position: | 342-731 |
| Cow position: | chr18:33953937-33953547 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 342-731 |
| Cow position: | chr18:54172213-54171824 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 48, 85 |
| Conread position: | 359-731 |
| Cow position: | chr18:48221526-48221898 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 300, 72 |
| Conread position: | 370-719 |
| Cow position: | chr18:47719911-47719575 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 147, 170 |
| Conread position: | 373-719 |
| Cow position: | chr18:23944710-23944364 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 286, 137 |
| Conread position: | 383-731 |
| Cow position: | chr18:22602158-22602508 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 234, 127 |
| Conread position: | 384-692 |
| Cow position: | chr18:51310259-51310564 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 225, 116 |
| Conread position: | 384-719 |
| Cow position: | chr18:2020009-2019677 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 393-731 |
| Cow position: | chr18:40478066-40478408 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 70, 89 |
| Conread position: | 394-716 |
| Cow position: | chr18:17992879-17992556 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 255, 116 |
| Conread position: | 397-719 |
| Cow position: | chr18:51257668-51257986 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 406-719 |
| Cow position: | chr18:27986723-27987036 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 253, 104 |
| Conread position: | 463-731 |
| Cow position: | chr18:16393888-16393620 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 197, 41 |
| Conread position: | 519-719 |
| Cow position: | chr18:54269276-54269475 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 139, 16 |
| Conread position: | 566-719 |
| Cow position: | chr18:40345472-40345315 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 93, 134 |
Show alignments to all cow chromosomes.