Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               259-719
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               260-711
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               317
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               6, 109
               

               Conread position:
               263-480
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               263-642
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               265
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               19, 79
               

               Conread position:
               263-716
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               310
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 77
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               270-716
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               276-462
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               280-731
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               379, 123
               

               Conread position:
               283-706
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               284-501
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               284-509
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               284-597
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 176
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 185
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 43
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 136
               

               Conread position:
               285-581
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               285-719
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               285-719
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               285-719
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               285
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               375, 41
               

               Conread position:
               285-720
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               299-716
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               285
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               303-719
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 68
               

               Conread position:
               303-731
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 208
               

               Conread position:
               305-719
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               305-731
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 125
               

               Conread position:
               306-731
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               312-477
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               315-719
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               319-731
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 47
               

               Conread position:
               324-700
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               340, 75
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 188
               

               Conread position:
               325-719
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               328-632
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               333-731
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 77
               

               Conread position:
               336-505
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               336-647
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               336-715
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 35
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 174
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               320, 153
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               323, 7
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               323, 20
               

               Conread position:
               337-731
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 151
               

               Conread position:
               337-731
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               169, 232
               

               Conread position:
               338-731
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               311, 121
               

               Conread position:
               340-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 170
               

               Conread position:
               341-691
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               318, 160
               

               Conread position:
               341-705
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 71
               

               Conread position:
               341-714
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               278, 173
               

               Conread position:
               341-716
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               257
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-730
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               268
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               276, 30
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               269
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               276, 27
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               276, 37
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               342-691
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               307, 51
               

               Conread position:
               342-731
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               258, 13
               

               Conread position:
               342-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 174
               

               Conread position:
               342-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 163
               

               Conread position:
               344-704
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               312, 135
               

               Conread position:
               344-731
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 181
               

               Conread position:
               344-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               345-719
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               90, 122
               

               Conread position:
               350-725
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               308, 43
               

               Conread position:
               351-535
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               351-731
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 159
               

               Conread position:
               354-599
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               81, 28
               

               Conread position:
               355-719
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 155
               

               Conread position:
               355-719
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               294, 34
               

               Conread position:
               359-719
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               300, 45
               

               Conread position:
               367-630
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               239, 40
               

               Conread position:
               373-731
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 119
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 126
               

               Conread position:
               431-725
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               174, 73
               

               Conread position:
               434-719
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               439-725
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               280, 52
               

               Conread position:
               448-712
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               515-719
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               544-719
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               546-731
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               112, 57
               
Show alignments to all cow chromosomes.