Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               260-549
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               262-725
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               263-509
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-608
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               19, 149
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 66
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               267-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               284-642
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 184
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               28, 107
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               22, 88
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               285-706
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               294-714
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               360, 7
               

               Conread position:
               298-588
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 189
               

               Conread position:
               305-713
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 211
               

               Conread position:
               305-719
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               246, 52
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 66
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 157
               

               Conread position:
               337-664
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               337-716
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 205
               

               Conread position:
               337-716
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               318, 142
               

               Conread position:
               340-731
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               24, 104
               

               Conread position:
               341-592
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-610
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               244, 138
               

               Conread position:
               342-693
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 169
               

               Conread position:
               359-716
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               133, 176
               

               Conread position:
               370-731
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               286, 67
               

               Conread position:
               373-719
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 137
               

               Conread position:
               383-719
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               383-731
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               234, 127
               

               Conread position:
               384-701
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               237, 120
               

               Conread position:
               385-731
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               388-669
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               390-719
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               403-731
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               209, 107
               

               Conread position:
               429-719
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               185, 91
               
Show alignments to all cow chromosomes.