Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 260-549 |
| Cow position: | chr20:15291548-15291843 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 262-725 |
| Cow position: | chr20:22206040-22206526 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 111 |
| Conread position: | 263-509 |
| Cow position: | chr20:35118755-35119005 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-608 |
| Cow position: | chr20:8005009-8004662 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 19, 149 |
| Conread position: | 263-719 |
| Cow position: | chr20:13762416-13762872 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 263-731 |
| Cow position: | chr20:5534451-5534921 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr20:25851482-25851008 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 66 |
| Conread position: | 263-731 |
| Cow position: | chr20:27868701-27869179 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr20:30683842-30684317 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 267-719 |
| Cow position: | chr20:20755917-20755453 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 284-642 |
| Cow position: | chr20:5575221-5575567 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 184 |
| Conread position: | 284-716 |
| Cow position: | chr20:2676648-2677083 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 296 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 284-716 |
| Cow position: | chr20:23470132-23469692 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-716 |
| Cow position: | chr20:37578983-37579423 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 298 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 28, 107 |
| Conread position: | 284-719 |
| Cow position: | chr20:13757791-13758229 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 284-731 |
| Cow position: | chr20:7116942-7116487 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-731 |
| Cow position: | chr20:22718136-22717713 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 285-706 |
| Cow position: | chr20:8994284-8993861 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 294-714 |
| Cow position: | chr20:13665618-13665236 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 295 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 360, 7 |
| Conread position: | 298-588 |
| Cow position: | chr20:29947727-29948020 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 189 |
| Conread position: | 305-713 |
| Cow position: | chr20:20905629-20905225 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 211 |
| Conread position: | 305-719 |
| Cow position: | chr20:2791806-2791376 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 290 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 336-719 |
| Cow position: | chr20:10102955-10102579 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 246, 52 |
| Conread position: | 336-731 |
| Cow position: | chr20:4800061-4799669 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 336-731 |
| Cow position: | chr20:12439175-12438779 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 66 |
| Conread position: | 336-731 |
| Cow position: | chr20:23798468-23798864 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 157 |
| Conread position: | 337-664 |
| Cow position: | chr20:11276685-11276386 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 337-716 |
| Cow position: | chr20:15064348-15064736 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 205 |
| Conread position: | 337-716 |
| Cow position: | chr20:19437551-19437925 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 318, 142 |
| Conread position: | 340-731 |
| Cow position: | chr20:28593335-28593728 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 341-592 |
| Cow position: | chr20:31123996-31124244 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-610 |
| Cow position: | chr20:822348-822607 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 244, 138 |
| Conread position: | 342-693 |
| Cow position: | chr20:21393163-21393510 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 169 |
| Conread position: | 359-716 |
| Cow position: | chr20:3252531-3252169 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 133, 176 |
| Conread position: | 370-731 |
| Cow position: | chr20:10846456-10846096 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 242 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 286, 67 |
| Conread position: | 373-719 |
| Cow position: | chr20:28160403-28160750 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 137 |
| Conread position: | 383-719 |
| Cow position: | chr20:35973769-35973439 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 84 |
| Conread position: | 383-731 |
| Cow position: | chr20:5561083-5560733 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 234, 127 |
| Conread position: | 384-701 |
| Cow position: | chr20:35103583-35103903 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 237, 120 |
| Conread position: | 385-731 |
| Cow position: | chr20:15098234-15097896 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 388-669 |
| Cow position: | chr20:3032575-3032844 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 390-719 |
| Cow position: | chr20:3270362-3270674 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 403-731 |
| Cow position: | chr20:28565948-28565614 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 209, 107 |
| Conread position: | 429-719 |
| Cow position: | chr20:7085890-7085605 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 185, 91 |
Show alignments to all cow chromosomes.