Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 258-731 |
| Cow position: | chr21:33251012-33251493 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 262-716 |
| Cow position: | chr21:21516838-21517289 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 263-704 |
| Cow position: | chr21:10566301-10566748 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 263-719 |
| Cow position: | chr21:1190665-1191137 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 263-731 |
| Cow position: | chr21:2884114-2883647 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 270-716 |
| Cow position: | chr21:993392-992933 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 48, 250 |
| Conread position: | 271-593 |
| Cow position: | chr21:18692393-18692717 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 279-700 |
| Cow position: | chr21:13124348-13123929 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 108, 63 |
| Conread position: | 279-716 |
| Cow position: | chr21:358665-359102 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 284-502 |
| Cow position: | chr21:35089344-35089573 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 284-509 |
| Cow position: | chr21:41952826-41953060 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 284-719 |
| Cow position: | chr21:48115754-48116198 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 284-725 |
| Cow position: | chr21:20745082-20744662 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 284-731 |
| Cow position: | chr21:3778421-3778867 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 27 |
| Conread position: | 284-731 |
| Cow position: | chr21:10849727-10850181 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-731 |
| Cow position: | chr21:31560000-31559552 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 285-647 |
| Cow position: | chr21:47939137-47939493 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 293, 23 |
| Conread position: | 285-815 |
| Cow position: | chr21:34259554-34259039 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 345 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 374, 23 |
| Conread position: | 302-731 |
| Cow position: | chr21:11453989-11453555 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 24, 70 |
| Conread position: | 305-652 |
| Cow position: | chr21:34055241-34054898 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 37, 143 |
| Conread position: | 305-716 |
| Cow position: | chr21:4083326-4083732 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 118 |
| Conread position: | 324-716 |
| Cow position: | chr21:4183238-4183610 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 327-527 |
| Cow position: | chr21:19609809-19610010 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 185 |
| Conread position: | 336-720 |
| Cow position: | chr21:23860486-23860873 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 153 |
| Conread position: | 336-731 |
| Cow position: | chr21:3614996-3615393 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 74 |
| Conread position: | 336-734 |
| Cow position: | chr21:46915296-46915691 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 86, 78 |
| Conread position: | 341-692 |
| Cow position: | chr21:2501646-2501992 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 170 |
| Conread position: | 341-693 |
| Cow position: | chr21:1292465-1292114 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 58, 101 |
| Conread position: | 341-716 |
| Cow position: | chr21:2476798-2476426 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 341-731 |
| Cow position: | chr21:4090358-4090750 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 32, 196 |
| Conread position: | 341-731 |
| Cow position: | chr21:7267823-7267442 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 152, 87 |
| Conread position: | 341-731 |
| Cow position: | chr21:26638747-26638364 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 315, 139 |
| Conread position: | 341-731 |
| Cow position: | chr21:27708471-27708863 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-731 |
| Cow position: | chr21:37044631-37045014 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-743 |
| Cow position: | chr21:145629-146033 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 169 |
| Conread position: | 344-719 |
| Cow position: | chr21:2530413-2530038 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 312, 22 |
| Conread position: | 349-643 |
| Cow position: | chr21:5016313-5016020 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 190, 152 |
| Conread position: | 366-700 |
| Cow position: | chr21:4076581-4076915 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 293, 170 |
| Conread position: | 384-731 |
| Cow position: | chr21:4222943-4222586 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 73 |
| Conread position: | 388-719 |
| Cow position: | chr21:2789226-2788902 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 19, 126 |
| Conread position: | 389-647 |
| Cow position: | chr21:6699806-6699544 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 16, 119 |
| Conread position: | 391-700 |
| Cow position: | chr21:47947875-47948179 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 226, 119 |
| Conread position: | 393-719 |
| Cow position: | chr21:34292780-34293106 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 161, 111 |
| Conread position: | 416-703 |
| Cow position: | chr21:36714424-36714705 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 47 |
Show alignments to all cow chromosomes.