Cow genome map
Conread name: | Lng1-LNG010021B07 |
Conread position: | 263-719 |
Cow position: | chr22:21588788-21589243 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr22:561249-560777 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr22:17329287-17328811 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 65 |
Conread position: | 263-731 |
Cow position: | chr22:19144248-19143771 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr22:39470067-39469591 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 54 |
Conread position: | 263-731 |
Cow position: | chr22:42990626-42991100 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 39 |
Conread position: | 279-716 |
Cow position: | chr22:33350641-33351082 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 32 |
Conread position: | 281-598 |
Cow position: | chr22:526438-526119 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 213 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 284-693 |
Cow position: | chr22:44456786-44457206 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 287 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 42, 14 |
Conread position: | 284-843 |
Cow position: | chr22:309211-309751 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 50 |
Conread position: | 285-655 |
Cow position: | chr22:36534480-36534117 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 285-731 |
Cow position: | chr22:44933455-44933908 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 12 |
Conread position: | 286-684 |
Cow position: | chr22:1046862-1047258 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 99 |
Conread position: | 305-498 |
Cow position: | chr22:44474817-44475007 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 140 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 305-719 |
Cow position: | chr22:7277014-7277440 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 26 |
Conread position: | 324-731 |
Cow position: | chr22:18476243-18475838 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 281 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 16, 171 |
Conread position: | 324-731 |
Cow position: | chr22:27310259-27309845 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 276 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 14, 192 |
Conread position: | 336-479 |
Cow position: | chr22:27386855-27386712 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 104 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 336-719 |
Cow position: | chr22:1293957-1293580 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 26 |
Conread position: | 341-701 |
Cow position: | chr22:10910316-10909959 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 246 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 12, 170 |
Conread position: | 341-731 |
Cow position: | chr22:693178-693560 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 263 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 278, 19 |
Conread position: | 341-731 |
Cow position: | chr22:3278813-3278426 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 139 |
Conread position: | 341-731 |
Cow position: | chr22:5233760-5233377 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 265 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 341-731 |
Cow position: | chr22:5307653-5308031 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 170 |
Conread position: | 341-731 |
Cow position: | chr22:6984791-6985183 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 265 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 341-731 |
Cow position: | chr22:10546187-10546573 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 261 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 341-731 |
Cow position: | chr22:16200031-16200414 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 261 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 315, 169 |
Conread position: | 341-731 |
Cow position: | chr22:24949366-24949758 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 276, 169 |
Conread position: | 341-731 |
Cow position: | chr22:35672819-35672427 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 258 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 315, 169 |
Conread position: | 341-731 |
Cow position: | chr22:44370077-44369691 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 262 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 315, 138 |
Conread position: | 341-731 |
Cow position: | chr22:44489423-44489815 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 266 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 126, 177 |
Conread position: | 342-719 |
Cow position: | chr22:15850883-15851251 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 260 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 317, 102 |
Conread position: | 343-745 |
Cow position: | chr22:44395321-44395723 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 110 |
Conread position: | 344-700 |
Cow position: | chr22:8136667-8136301 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 255 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 9, 181 |
Conread position: | 344-719 |
Cow position: | chr22:9657863-9658238 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 264 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 44, 77 |
Conread position: | 350-719 |
Cow position: | chr22:44353402-44353040 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 248 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 308, 160 |
Conread position: | 353-693 |
Cow position: | chr22:13772344-13772671 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 223 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 306, 116 |
Conread position: | 359-716 |
Cow position: | chr22:39882618-39882263 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 244 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 300, 151 |
Conread position: | 359-731 |
Cow position: | chr22:118257-117887 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 195, 22 |
Conread position: | 361-647 |
Cow position: | chr22:41420128-41419849 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 187 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 175, 0 |
Conread position: | 366-719 |
Cow position: | chr22:1318956-1319313 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 246 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 48, 149 |
Conread position: | 366-719 |
Cow position: | chr22:46852904-46853258 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 236 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 67, 74 |
Conread position: | 373-719 |
Cow position: | chr22:5672307-5672653 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 234 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 286, 137 |
Conread position: | 383-805 |
Cow position: | chr22:37131229-37131650 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 275 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 31, 128 |
Conread position: | 389-731 |
Cow position: | chr22:36861946-36861602 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 121 |
Conread position: | 393-731 |
Cow position: | chr22:18816793-18816453 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 230 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 200, 117 |
Conread position: | 394-731 |
Cow position: | chr22:36736364-36736691 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 234 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 265, 63 |
Conread position: | 407-719 |
Cow position: | chr22:158312-157986 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 229 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 104, 132 |
Conread position: | 428-713 |
Cow position: | chr22:10964805-10965097 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 192 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 9, 177 |
Conread position: | 434-704 |
Cow position: | chr22:4065270-4065542 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 191 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 183, 76 |
Show alignments to all cow chromosomes.