Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 263-545 |
| Cow position: | chr23:2756946-2757239 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 187 |
| Conread position: | 263-692 |
| Cow position: | chr23:31595717-31595288 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 23, 46 |
| Conread position: | 263-713 |
| Cow position: | chr23:2715814-2716258 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 389, 35 |
| Conread position: | 263-731 |
| Cow position: | chr23:2027675-2027190 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 119 |
| Conread position: | 263-731 |
| Cow position: | chr23:27398956-27399432 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 271-413 |
| Cow position: | chr23:7749765-7749907 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 33, 66 |
| Conread position: | 282-592 |
| Cow position: | chr23:14966500-14966188 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 8, 127 |
| Conread position: | 283-713 |
| Cow position: | chr23:2796085-2795655 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 284-704 |
| Cow position: | chr23:15220418-15219996 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 283 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-725 |
| Cow position: | chr23:2339881-2340327 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 199 |
| Conread position: | 284-731 |
| Cow position: | chr23:3882219-3881770 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 284-731 |
| Cow position: | chr23:4641145-4640696 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 284-731 |
| Cow position: | chr23:4815553-4816001 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 302 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 284-731 |
| Cow position: | chr23:15525098-15525538 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 284-731 |
| Cow position: | chr23:36031895-36031445 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 285-731 |
| Cow position: | chr23:3013116-3013574 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 298 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 206, 23 |
| Conread position: | 297-647 |
| Cow position: | chr23:22147769-22147418 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 302-731 |
| Cow position: | chr23:19951093-19950655 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 14, 71 |
| Conread position: | 303-731 |
| Cow position: | chr23:19017214-19017624 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 26 |
| Conread position: | 315-874 |
| Cow position: | chr23:19449531-19450099 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 324-731 |
| Cow position: | chr23:28216809-28217219 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 270 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 14, 182 |
| Conread position: | 336-716 |
| Cow position: | chr23:22876096-22875721 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 336-731 |
| Cow position: | chr23:1025512-1025133 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 269 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 320, 22 |
| Conread position: | 336-732 |
| Cow position: | chr23:19489072-19489467 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 337-592 |
| Cow position: | chr23:14975229-14974984 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 338-731 |
| Cow position: | chr23:16617300-16616921 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 341-696 |
| Cow position: | chr23:1141106-1141446 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 244, 138 |
| Conread position: | 341-816 |
| Cow position: | chr23:4509643-4510104 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 212, 169 |
| Conread position: | 342-734 |
| Cow position: | chr23:20301752-20302145 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 289, 5 |
| Conread position: | 351-693 |
| Cow position: | chr23:7273208-7273539 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 308, 123 |
| Conread position: | 355-719 |
| Cow position: | chr23:5779535-5779170 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 181 |
| Conread position: | 355-719 |
| Cow position: | chr23:5875220-5874858 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 284, 11 |
| Conread position: | 362-716 |
| Cow position: | chr23:967790-967432 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 148 |
| Conread position: | 383-700 |
| Cow position: | chr23:1330707-1330392 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 127 |
| Conread position: | 384-707 |
| Cow position: | chr23:989061-988737 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 126 |
| Conread position: | 394-710 |
| Cow position: | chr23:16481761-16481445 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 116 |
| Conread position: | 394-719 |
| Cow position: | chr23:2574155-2574481 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 265, 110 |
| Conread position: | 403-719 |
| Cow position: | chr23:30636703-30636385 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 256, 107 |
| Conread position: | 434-731 |
| Cow position: | chr23:31446444-31446743 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 183, 70 |
| Conread position: | 448-693 |
| Cow position: | chr23:2725506-2725747 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 210, 47 |
| Conread position: | 486-702 |
| Cow position: | chr23:16616181-16615969 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 173, 9 |
| Conread position: | 495-719 |
| Cow position: | chr23:4751704-4751930 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 164, 40 |
Show alignments to all cow chromosomes.