Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 262-515 |
| Cow position: | chr24:30117051-30117312 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 262-706 |
| Cow position: | chr24:32330887-32331314 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 140 |
| Conread position: | 262-716 |
| Cow position: | chr24:6351733-6352194 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 259 |
| Conread position: | 263-581 |
| Cow position: | chr24:29186340-29186665 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 45 |
| Conread position: | 263-719 |
| Cow position: | chr24:19832920-19833383 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 263-731 |
| Cow position: | chr24:4415990-4415511 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 267-731 |
| Cow position: | chr24:14385064-14384599 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 270-708 |
| Cow position: | chr24:14873794-14873351 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 284-551 |
| Cow position: | chr24:149031-148763 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 33, 14 |
| Conread position: | 284-719 |
| Cow position: | chr24:35842036-35841615 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 27 |
| Conread position: | 284-719 |
| Cow position: | chr24:39678003-39678431 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 285-704 |
| Cow position: | chr24:12161446-12161866 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 285-719 |
| Cow position: | chr24:1447142-1447559 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 301 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 294-664 |
| Cow position: | chr24:32125911-32125571 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 268, 20 |
| Conread position: | 304-719 |
| Cow position: | chr24:13181751-13181348 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 324-640 |
| Cow position: | chr24:37216334-37216651 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 324-731 |
| Cow position: | chr24:6433841-6434255 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 327-716 |
| Cow position: | chr24:22792782-22793173 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 264 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 11, 186 |
| Conread position: | 335-719 |
| Cow position: | chr24:36707477-36707852 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 157, 124 |
| Conread position: | 336-654 |
| Cow position: | chr24:12236681-12236986 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 336-719 |
| Cow position: | chr24:6335315-6335697 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 103 |
| Conread position: | 336-719 |
| Cow position: | chr24:15392680-15392307 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 157 |
| Conread position: | 336-731 |
| Cow position: | chr24:12289099-12288715 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 64 |
| Conread position: | 337-731 |
| Cow position: | chr24:13021290-13021682 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 36, 29 |
| Conread position: | 338-732 |
| Cow position: | chr24:12085823-12086213 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 33 |
| Conread position: | 340-606 |
| Cow position: | chr24:38635368-38635623 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 56, 154 |
| Conread position: | 341-640 |
| Cow position: | chr24:20267840-20268136 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-719 |
| Cow position: | chr24:33932990-33933368 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 163 |
| Conread position: | 341-730 |
| Cow position: | chr24:44017168-44017559 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 342-719 |
| Cow position: | chr24:6144983-6145362 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 251 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 314, 168 |
| Conread position: | 344-693 |
| Cow position: | chr24:12207768-12208110 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 353-654 |
| Cow position: | chr24:35991017-35990728 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 295, 89 |
| Conread position: | 355-725 |
| Cow position: | chr24:12798113-12797757 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 293, 7 |
| Conread position: | 361-719 |
| Cow position: | chr24:14391079-14390727 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 300, 149 |
| Conread position: | 363-731 |
| Cow position: | chr24:13187837-13188199 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 370-719 |
| Cow position: | chr24:6537223-6537548 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 386-731 |
| Cow position: | chr24:12485650-12485303 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 263, 124 |
| Conread position: | 400-731 |
| Cow position: | chr24:13531853-13531522 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 178, 136 |
| Conread position: | 448-731 |
| Cow position: | chr24:2635849-2636134 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 169, 62 |
| Conread position: | 457-731 |
| Cow position: | chr24:8029889-8030165 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 162, 57 |
| Conread position: | 515-706 |
| Cow position: | chr24:12940003-12940196 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 145, 22 |
| Conread position: | 547-705 |
| Cow position: | chr24:30117315-30117477 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 105, 36 |
| Conread position: | 578-719 |
| Cow position: | chr24:9092417-9092271 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.