Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               258-535
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               259-548
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               259-719
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               259-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               260-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               263-524
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-545
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-725
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               264-731
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               272-506
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               272-752
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               320
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               284-508
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               20, 113
               

               Conread position:
               284-524
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               284-691
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-715
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 214
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               308
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               298
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 226
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               299
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               285-716
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 210
               

               Conread position:
               303-637
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               303-731
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               277
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               14, 193
               

               Conread position:
               336-545
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               157, 175
               

               Conread position:
               336-704
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               182, 22
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               67, 43
               

               Conread position:
               337-732
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               174, 20
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 53
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               276, 172
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               342-719
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 165
               

               Conread position:
               358-527
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               365-719
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               243
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               294, 161
               

               Conread position:
               373-719
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               286, 137
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 40
               

               Conread position:
               384-731
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               220, 136
               

               Conread position:
               394-731
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               87, 187
               

               Conread position:
               404-732
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               194, 105
               

               Conread position:
               406-731
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               249, 104
               

               Conread position:
               410-731
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               191, 69
               

               Conread position:
               516-708
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.