Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 258-535 |
| Cow position: | chr28:1504130-1504415 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 259-548 |
| Cow position: | chr28:33251853-33252129 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 259-719 |
| Cow position: | chr28:34648441-34648904 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 70 |
| Conread position: | 259-731 |
| Cow position: | chr28:22261658-22261178 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 260-731 |
| Cow position: | chr28:8378060-8378537 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 263-524 |
| Cow position: | chr28:15378520-15378251 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-545 |
| Cow position: | chr28:5752666-5752378 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-719 |
| Cow position: | chr28:14706173-14705711 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-719 |
| Cow position: | chr28:17387975-17388442 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-725 |
| Cow position: | chr28:15584899-15585360 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 263-731 |
| Cow position: | chr28:781891-782368 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr28:2083098-2083575 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 263-731 |
| Cow position: | chr28:5565355-5565835 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr28:10582487-10582013 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 263-731 |
| Cow position: | chr28:13459468-13459942 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 263-731 |
| Cow position: | chr28:17668018-17667541 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 263-731 |
| Cow position: | chr28:34593339-34593812 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 264-731 |
| Cow position: | chr28:29819069-29819541 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 272-506 |
| Cow position: | chr28:18102395-18102159 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 272-752 |
| Cow position: | chr28:5812214-5812698 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 284-508 |
| Cow position: | chr28:10464325-10464097 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 284-524 |
| Cow position: | chr28:15035897-15035653 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 284-691 |
| Cow position: | chr28:13522252-13522660 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-715 |
| Cow position: | chr28:18089487-18089051 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 168 |
| Conread position: | 284-719 |
| Cow position: | chr28:22827574-22828011 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 214 |
| Conread position: | 284-731 |
| Cow position: | chr28:1168645-1168194 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 284-731 |
| Cow position: | chr28:3193256-3192818 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 308 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 284-731 |
| Cow position: | chr28:7001521-7001961 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-731 |
| Cow position: | chr28:12149848-12150283 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 298 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 284-731 |
| Cow position: | chr28:18520942-18520488 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 226 |
| Conread position: | 284-731 |
| Cow position: | chr28:26426742-26426301 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 284-731 |
| Cow position: | chr28:32792860-32792407 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 285-716 |
| Cow position: | chr28:34324344-34324782 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 210 |
| Conread position: | 303-637 |
| Cow position: | chr28:26007576-26007903 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 73 |
| Conread position: | 303-731 |
| Cow position: | chr28:15920917-15920493 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 324-731 |
| Cow position: | chr28:14750109-14750521 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 275 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 14, 193 |
| Conread position: | 336-545 |
| Cow position: | chr28:7739830-7740037 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 157, 175 |
| Conread position: | 336-704 |
| Cow position: | chr28:5796406-5796761 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 182, 22 |
| Conread position: | 336-719 |
| Cow position: | chr28:10619520-10619149 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 337-732 |
| Cow position: | chr28:10591782-10591401 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 174, 20 |
| Conread position: | 341-731 |
| Cow position: | chr28:1952724-1953103 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 341-731 |
| Cow position: | chr28:6780746-6780357 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 276, 172 |
| Conread position: | 341-731 |
| Cow position: | chr28:13441296-13440904 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-731 |
| Cow position: | chr28:15950562-15950954 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 262 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 342-719 |
| Cow position: | chr28:8721863-8721488 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 165 |
| Conread position: | 358-527 |
| Cow position: | chr28:24667214-24667380 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 365-719 |
| Cow position: | chr28:1387785-1387434 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 294, 161 |
| Conread position: | 373-719 |
| Cow position: | chr28:15681506-15681848 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 286, 137 |
| Conread position: | 384-719 |
| Cow position: | chr28:9155655-9155326 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 40 |
| Conread position: | 384-731 |
| Cow position: | chr28:9953759-9954109 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 220, 136 |
| Conread position: | 394-731 |
| Cow position: | chr28:17330898-17330553 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 87, 187 |
| Conread position: | 404-732 |
| Cow position: | chr28:7901003-7901323 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 194, 105 |
| Conread position: | 406-731 |
| Cow position: | chr28:1815221-1814895 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 249, 104 |
| Conread position: | 410-731 |
| Cow position: | chr28:7821915-7822230 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 191, 69 |
| Conread position: | 516-708 |
| Cow position: | chr28:18102171-18101984 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.