Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               256-731
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               260-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 45
               

               Conread position:
               263-620
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-704
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 216
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               311
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               23, 46
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               311
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               281-706
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 95
               

               Conread position:
               281-724
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               282-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               282-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               307
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               284-480
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               284-580
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               284-654
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               284-706
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 92
               

               Conread position:
               284-715
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               304
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 44
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               285-716
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               266, 23
               

               Conread position:
               285-719
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               295
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               305-719
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               273
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               324-704
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               14, 214
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 38
               

               Conread position:
               336-732
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 142
               

               Conread position:
               337-608
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               28, 36
               

               Conread position:
               337-731
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               341-509
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 164
               

               Conread position:
               341-716
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               137, 171
               

               Conread position:
               341-716
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               293, 139
               

               Conread position:
               341-716
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               315, 152
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               344-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               350-731
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               355-693
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               304, 18
               

               Conread position:
               357-714
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               307, 89
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 116
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               275, 126
               

               Conread position:
               386-716
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               125, 42
               

               Conread position:
               406-731
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               249, 74
               

               Conread position:
               473-725
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               497-733
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               162, 17
               

               Conread position:
               537-719
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               
Show alignments to all cow chromosomes.