Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               257-723
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               309
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               51, 134
               

               Conread position:
               259-719
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 41
               

               Conread position:
               262-719
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               263-520
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-715
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               312
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 257
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               312
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               263-730
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 45
               

               Conread position:
               266-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               270-731
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               271-731
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               272-719
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               304
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               282-621
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               282-716
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               284-557
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               284-642
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 209
               

               Conread position:
               284-647
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               284-648
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-678
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 43
               

               Conread position:
               284-700
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               284-705
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               297
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               30, 222
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 102
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 59
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               304
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               284-725
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               285-716
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 218
               

               Conread position:
               294-517
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               297-719
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               284
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               37, 77
               

               Conread position:
               302-731
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 151
               

               Conread position:
               303-684
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               303-716
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 82
               

               Conread position:
               304-664
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               30, 204
               

               Conread position:
               324-719
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 188
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               278
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               14, 188
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 188
               

               Conread position:
               325-719
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 99
               

               Conread position:
               325-731
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               13, 50
               

               Conread position:
               326-695
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               333, 13
               

               Conread position:
               333-731
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 177
               

               Conread position:
               335-706
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               313, 20
               

               Conread position:
               336-528
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               237, 19
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               274
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               323, 45
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 35
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               323, 174
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 174
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               275
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               24, 181
               

               Conread position:
               336-734
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 31
               

               Conread position:
               338-719
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 119
               

               Conread position:
               339-609
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               341-571
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               341-654
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               341-716
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               318, 169
               

               Conread position:
               341-729
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               276, 19
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               315, 138
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               263
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-838
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               297
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               149, 170
               

               Conread position:
               342-503
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               342-691
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               342-729
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 151
               

               Conread position:
               342-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 170
               

               Conread position:
               342-731
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 28
               

               Conread position:
               344-719
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               344-719
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 90
               

               Conread position:
               345-731
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               149, 166
               

               Conread position:
               351-725
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 112
               

               Conread position:
               352-661
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               141, 153
               

               Conread position:
               353-731
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               16, 158
               

               Conread position:
               354-716
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               354-731
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 8
               

               Conread position:
               359-731
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 151
               

               Conread position:
               363-731
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               130, 13
               

               Conread position:
               367-719
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 137
               

               Conread position:
               382-731
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               212, 111
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               250, 130
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 137
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               282, 56
               

               Conread position:
               389-693
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               269, 78
               

               Conread position:
               391-726
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               120, 51
               

               Conread position:
               394-719
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               270, 116
               

               Conread position:
               398-731
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               157, 112
               

               Conread position:
               401-635
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               402-719
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 82
               

               Conread position:
               406-727
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               246, 29
               

               Conread position:
               428-716
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               231, 67
               

               Conread position:
               537-731
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               122, 0
               
Show alignments to all cow chromosomes.