Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               259-592
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               5, 70
               

               Conread position:
               259-693
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               307
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 226
               

               Conread position:
               259-731
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 50
               

               Conread position:
               263-589
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               263-643
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 226
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               277-719
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               277-725
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               280-612
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 152
               

               Conread position:
               281-719
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               308
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               27, 189
               

               Conread position:
               281-731
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 11
               

               Conread position:
               282-535
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               282-715
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 12
               

               Conread position:
               283-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               284-589
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               284-615
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               284-658
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               284-693
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               22, 49
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 234
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               285-704
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               285-716
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 146
               

               Conread position:
               285-719
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               294-704
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               305-647
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 189
               

               Conread position:
               308-714
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 30
               

               Conread position:
               324-654
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 106
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               274
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               14, 43
               

               Conread position:
               324-734
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               279
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               325-731
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               330-532
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 182
               

               Conread position:
               336-716
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 175
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               319, 143
               

               Conread position:
               337-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 177
               

               Conread position:
               338-725
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               213, 22
               

               Conread position:
               341-592
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               341-719
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 169
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               361-731
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               298, 149
               

               Conread position:
               363-695
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               301, 53
               

               Conread position:
               384-602
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               394-719
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               265, 46
               

               Conread position:
               411-716
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               119, 158
               

               Conread position:
               418-731
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               177, 58
               

               Conread position:
               497-731
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               514-719
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               146, 23
               
Show alignments to all cow chromosomes.