Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 259-592 |
| Cow position: | chr4:41118304-41118646 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 259-693 |
| Cow position: | chr4:60631067-60630632 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 226 |
| Conread position: | 259-731 |
| Cow position: | chr4:43320459-43319975 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 50 |
| Conread position: | 263-589 |
| Cow position: | chr4:3357911-3358239 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 58, 34 |
| Conread position: | 263-643 |
| Cow position: | chr4:46713150-46712773 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-719 |
| Cow position: | chr4:33492993-33493461 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 263-719 |
| Cow position: | chr4:41330622-41331090 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr4:355098-355571 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr4:3960778-3961253 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 226 |
| Conread position: | 263-731 |
| Cow position: | chr4:24446016-24445539 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr4:31668513-31668975 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr4:36895556-36896035 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr4:43880293-43880770 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 263-731 |
| Cow position: | chr4:44724268-44724744 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr4:45050113-45049637 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr4:48025588-48026059 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 277-719 |
| Cow position: | chr4:11394118-11393689 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 277-725 |
| Cow position: | chr4:15193253-15193688 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 21 |
| Conread position: | 280-612 |
| Cow position: | chr4:41427828-41428160 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 281-719 |
| Cow position: | chr4:28830237-28830688 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 308 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 27, 189 |
| Conread position: | 281-731 |
| Cow position: | chr4:40825046-40824584 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 282-535 |
| Cow position: | chr4:15263748-15263493 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 8, 54 |
| Conread position: | 282-715 |
| Cow position: | chr4:22471420-22471831 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 8, 12 |
| Conread position: | 283-731 |
| Cow position: | chr4:6215339-6214891 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 126 |
| Conread position: | 284-589 |
| Cow position: | chr4:57978630-57978931 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 284-615 |
| Cow position: | chr4:33074175-33073844 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 284-658 |
| Cow position: | chr4:21358877-21359228 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 255 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 284-693 |
| Cow position: | chr4:60673113-60673521 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 284-719 |
| Cow position: | chr4:13491780-13492225 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 234 |
| Conread position: | 284-719 |
| Cow position: | chr4:25600393-25599969 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-731 |
| Cow position: | chr4:4905362-4905815 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 285-704 |
| Cow position: | chr4:8598918-8598514 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 285-716 |
| Cow position: | chr4:58883466-58883036 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 146 |
| Conread position: | 285-719 |
| Cow position: | chr4:66925224-66925654 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 294-704 |
| Cow position: | chr4:6449666-6449257 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 305-647 |
| Cow position: | chr4:17383000-17382650 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 189 |
| Conread position: | 308-714 |
| Cow position: | chr4:11383669-11384053 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 30 |
| Conread position: | 324-654 |
| Cow position: | chr4:9311488-9311816 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 324-731 |
| Cow position: | chr4:5879436-5879831 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 324-731 |
| Cow position: | chr4:6269371-6268967 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 324-731 |
| Cow position: | chr4:23114925-23114515 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 324-734 |
| Cow position: | chr4:528245-528656 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 279 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 325-731 |
| Cow position: | chr4:12241967-12241558 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 330-532 |
| Cow position: | chr4:54955229-54955432 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 182 |
| Conread position: | 336-716 |
| Cow position: | chr4:51044614-51044245 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 336-719 |
| Cow position: | chr4:1050357-1049971 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 175 |
| Conread position: | 336-731 |
| Cow position: | chr4:157792-158176 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 319, 143 |
| Conread position: | 337-731 |
| Cow position: | chr4:3125046-3125442 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 177 |
| Conread position: | 338-725 |
| Cow position: | chr4:3829765-3830136 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 213, 22 |
| Conread position: | 341-592 |
| Cow position: | chr4:41954064-41954311 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 27 |
| Conread position: | 341-719 |
| Cow position: | chr4:18516165-18516545 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 169 |
| Conread position: | 341-731 |
| Cow position: | chr4:13547293-13547689 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-731 |
| Cow position: | chr4:65224265-65223873 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 361-731 |
| Cow position: | chr4:17926965-17926593 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 298, 149 |
| Conread position: | 363-695 |
| Cow position: | chr4:21338688-21338367 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 301, 53 |
| Conread position: | 384-602 |
| Cow position: | chr4:11617750-11617972 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 394-719 |
| Cow position: | chr4:16359215-16359532 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 265, 46 |
| Conread position: | 411-716 |
| Cow position: | chr4:1497414-1497103 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 119, 158 |
| Conread position: | 418-731 |
| Cow position: | chr4:27442442-27442751 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 177, 58 |
| Conread position: | 497-731 |
| Cow position: | chr4:10408203-10408442 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 514-719 |
| Cow position: | chr4:66179545-66179339 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 146, 23 |
Show alignments to all cow chromosomes.