Cow genome map
Conread name: | Lng1-LNG010021B07 |
Conread position: | 255-610 |
Cow position: | chr5:54619751-54620097 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 260 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 19, 89 |
Conread position: | 259-611 |
Cow position: | chr5:41963657-41963303 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 244 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 23, 85 |
Conread position: | 259-731 |
Cow position: | chr5:10918077-10918553 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 49 |
Conread position: | 260-731 |
Cow position: | chr5:32945156-32945630 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 63 |
Conread position: | 263-667 |
Cow position: | chr5:68472275-68471875 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 256 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 58, 27 |
Conread position: | 263-704 |
Cow position: | chr5:49119999-49119553 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr5:416443-415967 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 315 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr5:1342518-1342038 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 64 |
Conread position: | 263-731 |
Cow position: | chr5:2430855-2430377 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 54 |
Conread position: | 263-731 |
Cow position: | chr5:2913728-2914206 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr5:3785088-3785559 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 256 |
Conread position: | 263-731 |
Cow position: | chr5:6158915-6158439 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 39 |
Conread position: | 263-731 |
Cow position: | chr5:7273144-7273607 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 255 |
Conread position: | 263-731 |
Cow position: | chr5:24097927-24098404 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr5:34695863-34696340 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 45 |
Conread position: | 263-731 |
Cow position: | chr5:37731622-37732101 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 68 |
Conread position: | 263-731 |
Cow position: | chr5:55627282-55627747 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 64 |
Conread position: | 264-731 |
Cow position: | chr5:3963761-3964226 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 312 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 52, 40 |
Conread position: | 269-731 |
Cow position: | chr5:45182811-45182354 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 321 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 25, 99 |
Conread position: | 272-611 |
Cow position: | chr5:23756283-23755950 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 241 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 5, 72 |
Conread position: | 281-715 |
Cow position: | chr5:30088408-30087982 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 171 |
Conread position: | 284-449 |
Cow position: | chr5:7503088-7502913 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 137 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 284-507 |
Cow position: | chr5:24151379-24151609 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 166 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 21, 132 |
Conread position: | 284-508 |
Cow position: | chr5:60900003-60900240 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 160 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 284-545 |
Cow position: | chr5:26070535-26070294 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 188 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 284-627 |
Cow position: | chr5:25001611-25001275 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 65 |
Conread position: | 284-664 |
Cow position: | chr5:46631109-46630741 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 50 |
Conread position: | 284-672 |
Cow position: | chr5:59282064-59282453 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 229 |
Conread position: | 284-685 |
Cow position: | chr5:26095047-26095433 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 232 |
Conread position: | 284-700 |
Cow position: | chr5:12682201-12681793 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 285 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 24, 230 |
Conread position: | 284-702 |
Cow position: | chr5:27488327-27488746 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 211 |
Conread position: | 284-704 |
Cow position: | chr5:27000506-27000909 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 302 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 20, 108 |
Conread position: | 284-705 |
Cow position: | chr5:29454541-29454136 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 280 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 27, 44 |
Conread position: | 284-719 |
Cow position: | chr5:48809407-48808972 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 80 |
Conread position: | 284-731 |
Cow position: | chr5:3504940-3504491 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 29 |
Conread position: | 284-731 |
Cow position: | chr5:14347066-14346622 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 291 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 27, 57 |
Conread position: | 285-684 |
Cow position: | chr5:34167367-34167768 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 299 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 20, 204 |
Conread position: | 286-719 |
Cow position: | chr5:51772040-51771602 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 299 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 20, 210 |
Conread position: | 287-716 |
Cow position: | chr5:26769127-26769551 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 286 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 19, 49 |
Conread position: | 294-716 |
Cow position: | chr5:57366686-57366281 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 287 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 14, 110 |
Conread position: | 305-719 |
Cow position: | chr5:56858376-56857952 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 190 |
Conread position: | 305-731 |
Cow position: | chr5:46663331-46663754 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 279 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 13, 20 |
Conread position: | 308-706 |
Cow position: | chr5:41359405-41358998 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 265 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 34, 25 |
Conread position: | 313-719 |
Cow position: | chr5:49100977-49101378 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 104 |
Conread position: | 321-654 |
Cow position: | chr5:58747237-58747558 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 25 |
Conread position: | 321-716 |
Cow position: | chr5:23227604-23227996 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 36 |
Conread position: | 324-696 |
Cow position: | chr5:46659058-46659452 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 267 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 145, 31 |
Conread position: | 335-719 |
Cow position: | chr5:29008712-29009103 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 258 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 8, 180 |
Conread position: | 336-586 |
Cow position: | chr5:23688112-23687864 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 183 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 200, 0 |
Conread position: | 336-654 |
Cow position: | chr5:46644069-46644374 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 208 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 336-664 |
Cow position: | chr5:6519263-6519569 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 336-693 |
Cow position: | chr5:23716582-23716233 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 22 |
Conread position: | 336-704 |
Cow position: | chr5:54793259-54792889 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 174 |
Conread position: | 336-713 |
Cow position: | chr5:49594092-49593718 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 278, 22 |
Conread position: | 336-716 |
Cow position: | chr5:27683386-27683029 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 279 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 13, 132 |
Conread position: | 336-719 |
Cow position: | chr5:6187919-6188310 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 259 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 35, 211 |
Conread position: | 336-731 |
Cow position: | chr5:4068349-4068745 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 174 |
Conread position: | 336-731 |
Cow position: | chr5:4384594-4384982 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 265 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 323, 35 |
Conread position: | 336-731 |
Cow position: | chr5:46739223-46738829 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 107 |
Conread position: | 336-731 |
Cow position: | chr5:57483182-57482791 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 25 |
Conread position: | 336-731 |
Cow position: | chr5:64782654-64782263 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 35 |
Conread position: | 338-671 |
Cow position: | chr5:58056374-58056044 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 223 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 29, 37 |
Conread position: | 341-633 |
Cow position: | chr5:10443838-10443554 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 193 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 13, 188 |
Conread position: | 341-654 |
Cow position: | chr5:37755775-37755465 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 211 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 341-719 |
Cow position: | chr5:41530197-41529828 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 266 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 243, 20 |
Conread position: | 341-730 |
Cow position: | chr5:26079854-26079464 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 25 |
Conread position: | 341-731 |
Cow position: | chr5:4019834-4019443 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 58 |
Conread position: | 341-731 |
Cow position: | chr5:10844509-10844119 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 261 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 276, 14 |
Conread position: | 341-731 |
Cow position: | chr5:14379532-14379918 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 270 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 32, 140 |
Conread position: | 341-731 |
Cow position: | chr5:24576278-24576669 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 260 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 32, 14 |
Conread position: | 341-731 |
Cow position: | chr5:27909904-27909515 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 264 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 315, 169 |
Conread position: | 341-731 |
Cow position: | chr5:32674360-32673987 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 17 |
Conread position: | 341-731 |
Cow position: | chr5:48468908-48468521 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 266 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 276, 14 |
Conread position: | 341-731 |
Cow position: | chr5:59059982-59060376 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 269 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 17, 26 |
Conread position: | 343-731 |
Cow position: | chr5:59144145-59144537 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 263 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 30, 23 |
Conread position: | 352-609 |
Cow position: | chr5:61273790-61273538 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 186 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 28, 123 |
Conread position: | 359-716 |
Cow position: | chr5:39165415-39165057 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 300, 10 |
Conread position: | 363-699 |
Cow position: | chr5:9687021-9686690 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 235 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 34, 132 |
Conread position: | 366-691 |
Cow position: | chr5:52804723-52805050 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 144 |
Conread position: | 373-719 |
Cow position: | chr5:49181682-49182019 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 240 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 286, 120 |
Conread position: | 373-731 |
Cow position: | chr5:45699677-45700039 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 250 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 236, 42 |
Conread position: | 374-706 |
Cow position: | chr5:31204198-31203874 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 225 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 119, 19 |
Conread position: | 384-694 |
Cow position: | chr5:32733835-32733528 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 216 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 275, 15 |
Conread position: | 394-716 |
Cow position: | chr5:41551506-41551187 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 224 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 265, 87 |
Conread position: | 396-664 |
Cow position: | chr5:12185079-12185344 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 186 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 410-719 |
Cow position: | chr5:29123366-29123058 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 228 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 44, 18 |
Conread position: | 457-734 |
Cow position: | chr5:54932738-54932460 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 192 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 162, 57 |
Show alignments to all cow chromosomes.