Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               255-610
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               259-611
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               259-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               260-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 63
               

               Conread position:
               263-667
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               263-704
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 64
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 256
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 255
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 68
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               264-731
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               312
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               52, 40
               

               Conread position:
               269-731
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               321
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 99
               

               Conread position:
               272-611
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               281-715
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 171
               

               Conread position:
               284-449
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               284-507
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 132
               

               Conread position:
               284-508
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               284-545
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               284-627
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               284-664
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               284-672
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 229
               

               Conread position:
               284-685
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 232
               

               Conread position:
               284-700
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               24, 230
               

               Conread position:
               284-702
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 211
               

               Conread position:
               284-704
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               302
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               20, 108
               

               Conread position:
               284-705
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 80
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               285-684
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 204
               

               Conread position:
               286-719
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               299
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               20, 210
               

               Conread position:
               287-716
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               294-716
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               305-719
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 190
               

               Conread position:
               305-731
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               308-706
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               313-719
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               321-654
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               321-716
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 36
               

               Conread position:
               324-696
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               145, 31
               

               Conread position:
               335-719
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 180
               

               Conread position:
               336-586
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               336-654
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               336-664
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               336-693
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 22
               

               Conread position:
               336-704
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 174
               

               Conread position:
               336-713
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 22
               

               Conread position:
               336-716
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               13, 132
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               35, 211
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 174
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               323, 35
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 107
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 25
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 35
               

               Conread position:
               338-671
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               341-633
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 188
               

               Conread position:
               341-654
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-719
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               243, 20
               

               Conread position:
               341-730
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               261
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               276, 14
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               32, 140
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               315, 169
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 17
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               266
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               276, 14
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               343-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               352-609
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               28, 123
               

               Conread position:
               359-716
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 10
               

               Conread position:
               363-699
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               34, 132
               

               Conread position:
               366-691
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 144
               

               Conread position:
               373-719
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               286, 120
               

               Conread position:
               373-731
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               236, 42
               

               Conread position:
               374-706
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               119, 19
               

               Conread position:
               384-694
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               275, 15
               

               Conread position:
               394-716
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               265, 87
               

               Conread position:
               396-664
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               410-719
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               457-734
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               162, 57
               
Show alignments to all cow chromosomes.