Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               256-731
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               259-731
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               260-731
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               262-592
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               10, 239
               

               Conread position:
               263-549
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-620
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               28, 59
               

               Conread position:
               263-638
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-725
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               321
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 41
               

               Conread position:
               271-719
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               319
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               42, 70
               

               Conread position:
               272-479
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               5, 68
               

               Conread position:
               278-719
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 63
               

               Conread position:
               280-498
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               60, 80
               

               Conread position:
               281-731
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               284-616
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 236
               

               Conread position:
               284-647
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               284-710
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               22, 145
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               304
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               285-465
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               286-731
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               288-683
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               305-731
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               312, 16
               

               Conread position:
               312-716
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               313-719
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 192
               

               Conread position:
               322-719
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 163
               

               Conread position:
               324-719
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               14, 67
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               14, 218
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               333-716
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 178
               

               Conread position:
               333-734
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 178
               

               Conread position:
               335-731
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 175
               

               Conread position:
               336-479
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               336-482
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               336-505
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               336-716
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 174
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 80
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 180
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 95
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 174
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 30
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               323, 35
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               277
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 169
               

               Conread position:
               337-672
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               22, 165
               

               Conread position:
               337-719
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 179
               

               Conread position:
               341-586
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               341-606
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               251, 25
               

               Conread position:
               341-638
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               276, 19
               

               Conread position:
               341-639
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-716
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 170
               

               Conread position:
               341-719
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 169
               

               Conread position:
               341-719
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               259
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               315, 173
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               78, 207
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               269
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               276, 138
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               341-734
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-792
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 152
               

               Conread position:
               342-693
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               307, 49
               

               Conread position:
               342-700
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               11, 5
               

               Conread position:
               344-612
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 5
               

               Conread position:
               344-719
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               31, 26
               

               Conread position:
               352-719
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               353-654
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               359-719
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               300, 69
               

               Conread position:
               359-731
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               195, 57
               

               Conread position:
               362-731
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               383-813
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               276, 38
               

               Conread position:
               384-668
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               65, 160
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               94, 64
               

               Conread position:
               394-731
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               270, 73
               

               Conread position:
               402-731
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               172, 93
               

               Conread position:
               403-731
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               227
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               249, 107
               

               Conread position:
               448-731
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               211, 56
               

               Conread position:
               532-725
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 89
               
Show alignments to all cow chromosomes.