Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               256-731
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               260-719
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               260-731
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               320
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               262-706
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               263-500
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-615
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-632
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-700
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               19, 42
               

               Conread position:
               263-716
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 125
               

               Conread position:
               267-731
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 37
               

               Conread position:
               272-452
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               7, 128
               

               Conread position:
               276-473
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               276-731
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               281-719
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 166
               

               Conread position:
               284-557
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               197, 26
               

               Conread position:
               284-575
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               50, 27
               

               Conread position:
               284-592
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               284-647
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               284-664
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               42, 92
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               364, 28
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               285-478
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 26
               

               Conread position:
               285-647
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               272
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               285-700
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               285-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 19
               

               Conread position:
               288-719
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               303-410
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               303-720
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               293
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               305-685
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 52
               

               Conread position:
               308-716
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               278
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               319-572
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 166
               

               Conread position:
               324-740
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               291
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               17, 122
               

               Conread position:
               330-716
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               315, 32
               

               Conread position:
               336-716
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               257
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               322, 19
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 22
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 30
               

               Conread position:
               337-611
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               337-716
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               312, 29
               

               Conread position:
               337-731
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 178
               

               Conread position:
               340-715
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               318, 107
               

               Conread position:
               340-715
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               319, 67
               

               Conread position:
               341-604
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               276, 19
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               268
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 148
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               81, 14
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               315, 163
               

               Conread position:
               341-772
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               317, 30
               

               Conread position:
               343-664
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               17, 168
               

               Conread position:
               343-715
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               238, 30
               

               Conread position:
               345-719
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               146, 25
               

               Conread position:
               348-716
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               351-598
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               142, 190
               

               Conread position:
               351-696
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               98, 160
               

               Conread position:
               351-719
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               255
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               257, 121
               

               Conread position:
               355-719
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 7
               

               Conread position:
               363-719
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               195, 130
               

               Conread position:
               372-701
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               128, 139
               

               Conread position:
               382-731
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               277, 7
               

               Conread position:
               383-725
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 19
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               211, 88
               

               Conread position:
               391-719
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               90, 150
               

               Conread position:
               392-731
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               396-731
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 120
               

               Conread position:
               397-719
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               262, 113
               

               Conread position:
               405-700
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               88, 106
               

               Conread position:
               433-716
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               85, 127
               

               Conread position:
               451-719
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               183, 85
               

               Conread position:
               473-731
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 47
               

               Conread position:
               490-731
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               169, 24
               

               Conread position:
               546-706
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 58
               
Show alignments to all cow chromosomes.