Cow genome map

Conread name: Lng1-LNG010021B07

Conread position: 256-731
Cow position: chr7:447118-446644 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 52

Conread position: 260-719
Cow position: chr7:67798362-67798825 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 313
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 48

Conread position: 260-731
Cow position: chr7:21128139-21127670 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 320
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 25, 48

Conread position: 262-706
Cow position: chr7:41876967-41876533 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 292
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 26

Conread position: 263-500
Cow position: chr7:33406701-33406453 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 45

Conread position: 263-615
Cow position: chr7:13538219-13537861 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 45

Conread position: 263-632
Cow position: chr7:38396735-38397111 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 263-700
Cow position: chr7:27786141-27786580 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 302
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 19, 42

Conread position: 263-716
Cow position: chr7:14140084-14139624 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 263-731
Cow position: chr7:1373140-1372665 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 263-731
Cow position: chr7:8145729-8145253 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 263-731
Cow position: chr7:21235502-21235024 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 45

Conread position: 263-731
Cow position: chr7:21984908-21985386 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 263-731
Cow position: chr7:34148617-34149079 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 314
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 125

Conread position: 267-731
Cow position: chr7:34485431-34485895 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 272-452
Cow position: chr7:3729590-3729773 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 128

Conread position: 276-473
Cow position: chr7:67653479-67653673 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 15

Conread position: 276-731
Cow position: chr7:39791262-39791727 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 28

Conread position: 281-719
Cow position: chr7:49290133-49290571 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 166

Conread position: 284-557
Cow position: chr7:31864405-31864662 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 197, 26

Conread position: 284-575
Cow position: chr7:47049961-47050247 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 50, 27

Conread position: 284-592
Cow position: chr7:20107006-20106707 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 50

Conread position: 284-647
Cow position: chr7:1736642-1736286 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 50

Conread position: 284-664
Cow position: chr7:20294410-20294786 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 42, 92

Conread position: 284-719
Cow position: chr7:20307234-20306817 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 28

Conread position: 284-731
Cow position: chr7:24808934-24808480 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 284-731
Cow position: chr7:54602382-54602838 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 285-478
Cow position: chr7:68084360-68084555 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 26

Conread position: 285-647
Cow position: chr7:53015030-53015382 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 272
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 21, 84

Conread position: 285-700
Cow position: chr7:41489679-41490073 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 23

Conread position: 285-731
Cow position: chr7:46902539-46902089 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 285-731
Cow position: chr7:64242402-64241955 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 19

Conread position: 288-719
Cow position: chr7:103041-102624 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 295
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 53

Conread position: 303-410
Cow position: chr7:37021214-37021323 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 303-720
Cow position: chr7:55281234-55280828 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 65, 37

Conread position: 305-685
Cow position: chr7:65340126-65339747 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 52

Conread position: 308-716
Cow position: chr7:68858521-68858123 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 5, 29

Conread position: 319-572
Cow position: chr7:54867910-54867667 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 42

Conread position: 324-731
Cow position: chr7:27102534-27102127 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 166

Conread position: 324-740
Cow position: chr7:58378612-58378197 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 291
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 17, 122

Conread position: 330-716
Cow position: chr7:1400767-1400386 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 270
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 315, 32

Conread position: 336-716
Cow position: chr7:48633003-48633368 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 322, 19

Conread position: 336-719
Cow position: chr7:3154375-3154755 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 22

Conread position: 336-719
Cow position: chr7:29469464-29469839 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 259
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 25

Conread position: 336-731
Cow position: chr7:6643282-6642891 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 30

Conread position: 337-611
Cow position: chr7:20429410-20429150 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 141, 0

Conread position: 337-716
Cow position: chr7:30119944-30119565 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 312, 29

Conread position: 337-731
Cow position: chr7:35287971-35287573 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 178

Conread position: 340-715
Cow position: chr7:60857753-60857399 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 318, 107

Conread position: 340-715
Cow position: chr7:63020451-63020824 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 67

Conread position: 341-604
Cow position: chr7:6720143-6720403 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 32, 25

Conread position: 341-731
Cow position: chr7:17275-16885 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 258
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 276, 19

Conread position: 341-731
Cow position: chr7:3235087-3234696 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 268
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 25

Conread position: 341-731
Cow position: chr7:6649058-6648668 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 148

Conread position: 341-731
Cow position: chr7:11467131-11466750 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 14

Conread position: 341-731
Cow position: chr7:47374592-47374984 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 341-731
Cow position: chr7:61558809-61559200 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 261
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 14

Conread position: 341-731
Cow position: chr7:63384949-63385337 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 264
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 315, 163

Conread position: 341-772
Cow position: chr7:522241-521820 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 289
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 317, 30

Conread position: 343-664
Cow position: chr7:35297998-35297683 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 17, 168

Conread position: 343-715
Cow position: chr7:52120481-52120108 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 246
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 238, 30

Conread position: 345-719
Cow position: chr7:1449096-1449460 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 146, 25

Conread position: 348-716
Cow position: chr7:7297268-7296905 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 29

Conread position: 351-598
Cow position: chr7:68907216-68907466 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 190

Conread position: 351-696
Cow position: chr7:27143946-27144279 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 160

Conread position: 351-719
Cow position: chr7:25686600-25686249 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 257, 121

Conread position: 355-719
Cow position: chr7:26890417-26890776 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 7

Conread position: 363-719
Cow position: chr7:51013593-51013944 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 254
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 195, 130

Conread position: 372-701
Cow position: chr7:62680029-62679686 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 128, 139

Conread position: 382-731
Cow position: chr7:19925174-19924827 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 277, 7

Conread position: 383-725
Cow position: chr7:59136069-59136408 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 19

Conread position: 384-719
Cow position: chr7:36084972-36085312 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 211, 88

Conread position: 391-719
Cow position: chr7:1358028-1357706 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 90, 150

Conread position: 392-731
Cow position: chr7:38536167-38536505 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 230
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 17

Conread position: 396-731
Cow position: chr7:45949498-45949163 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 120

Conread position: 397-719
Cow position: chr7:21976084-21975762 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 262, 113

Conread position: 405-700
Cow position: chr7:51911692-51911397 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 88, 106

Conread position: 433-716
Cow position: chr7:67811806-67812094 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 190
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 127

Conread position: 451-719
Cow position: chr7:993939-994211 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 183, 85

Conread position: 473-731
Cow position: chr7:23835849-23836109 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 47

Conread position: 490-731
Cow position: chr7:6489564-6489323 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 169, 24

Conread position: 546-706
Cow position: chr7:3729776-3729938 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 58

Show alignments to all cow chromosomes.