Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 256-731 |
| Cow position: | chr7:447118-446644 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 260-719 |
| Cow position: | chr7:67798362-67798825 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 313 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 260-731 |
| Cow position: | chr7:21128139-21127670 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 320 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 262-706 |
| Cow position: | chr7:41876967-41876533 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 263-500 |
| Cow position: | chr7:33406701-33406453 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-615 |
| Cow position: | chr7:13538219-13537861 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-632 |
| Cow position: | chr7:38396735-38397111 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-700 |
| Cow position: | chr7:27786141-27786580 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 263-716 |
| Cow position: | chr7:14140084-14139624 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr7:1373140-1372665 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 263-731 |
| Cow position: | chr7:8145729-8145253 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr7:21235502-21235024 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 263-731 |
| Cow position: | chr7:21984908-21985386 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr7:34148617-34149079 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 19, 125 |
| Conread position: | 267-731 |
| Cow position: | chr7:34485431-34485895 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 272-452 |
| Cow position: | chr7:3729590-3729773 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 128 |
| Conread position: | 276-473 |
| Cow position: | chr7:67653479-67653673 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 276-731 |
| Cow position: | chr7:39791262-39791727 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 281-719 |
| Cow position: | chr7:49290133-49290571 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 284-557 |
| Cow position: | chr7:31864405-31864662 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 197, 26 |
| Conread position: | 284-575 |
| Cow position: | chr7:47049961-47050247 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 284-592 |
| Cow position: | chr7:20107006-20106707 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 284-647 |
| Cow position: | chr7:1736642-1736286 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 284-664 |
| Cow position: | chr7:20294410-20294786 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 263 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 284-719 |
| Cow position: | chr7:20307234-20306817 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 364, 28 |
| Conread position: | 284-731 |
| Cow position: | chr7:24808934-24808480 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 284-731 |
| Cow position: | chr7:54602382-54602838 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 285-478 |
| Cow position: | chr7:68084360-68084555 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 26 |
| Conread position: | 285-647 |
| Cow position: | chr7:53015030-53015382 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 285-700 |
| Cow position: | chr7:41489679-41490073 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 285-731 |
| Cow position: | chr7:46902539-46902089 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 285-731 |
| Cow position: | chr7:64242402-64241955 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 288-719 |
| Cow position: | chr7:103041-102624 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 303-410 |
| Cow position: | chr7:37021214-37021323 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 303-720 |
| Cow position: | chr7:55281234-55280828 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 305-685 |
| Cow position: | chr7:65340126-65339747 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 32, 52 |
| Conread position: | 308-716 |
| Cow position: | chr7:68858521-68858123 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 278 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 5, 29 |
| Conread position: | 319-572 |
| Cow position: | chr7:54867910-54867667 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 324-731 |
| Cow position: | chr7:27102534-27102127 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 166 |
| Conread position: | 324-740 |
| Cow position: | chr7:58378612-58378197 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 291 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 17, 122 |
| Conread position: | 330-716 |
| Cow position: | chr7:1400767-1400386 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 315, 32 |
| Conread position: | 336-716 |
| Cow position: | chr7:48633003-48633368 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 257 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 322, 19 |
| Conread position: | 336-719 |
| Cow position: | chr7:3154375-3154755 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 22 |
| Conread position: | 336-719 |
| Cow position: | chr7:29469464-29469839 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 78, 25 |
| Conread position: | 336-731 |
| Cow position: | chr7:6643282-6642891 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 337-611 |
| Cow position: | chr7:20429410-20429150 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 337-716 |
| Cow position: | chr7:30119944-30119565 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 312, 29 |
| Conread position: | 337-731 |
| Cow position: | chr7:35287971-35287573 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 178 |
| Conread position: | 340-715 |
| Cow position: | chr7:60857753-60857399 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 318, 107 |
| Conread position: | 340-715 |
| Cow position: | chr7:63020451-63020824 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 67 |
| Conread position: | 341-604 |
| Cow position: | chr7:6720143-6720403 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-731 |
| Cow position: | chr7:17275-16885 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 276, 19 |
| Conread position: | 341-731 |
| Cow position: | chr7:3235087-3234696 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-731 |
| Cow position: | chr7:6649058-6648668 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 148 |
| Conread position: | 341-731 |
| Cow position: | chr7:11467131-11466750 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 14 |
| Conread position: | 341-731 |
| Cow position: | chr7:47374592-47374984 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 341-731 |
| Cow position: | chr7:61558809-61559200 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 261 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 341-731 |
| Cow position: | chr7:63384949-63385337 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 315, 163 |
| Conread position: | 341-772 |
| Cow position: | chr7:522241-521820 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 289 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 317, 30 |
| Conread position: | 343-664 |
| Cow position: | chr7:35297998-35297683 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 17, 168 |
| Conread position: | 343-715 |
| Cow position: | chr7:52120481-52120108 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 238, 30 |
| Conread position: | 345-719 |
| Cow position: | chr7:1449096-1449460 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 146, 25 |
| Conread position: | 348-716 |
| Cow position: | chr7:7297268-7296905 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 351-598 |
| Cow position: | chr7:68907216-68907466 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 142, 190 |
| Conread position: | 351-696 |
| Cow position: | chr7:27143946-27144279 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 98, 160 |
| Conread position: | 351-719 |
| Cow position: | chr7:25686600-25686249 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 257, 121 |
| Conread position: | 355-719 |
| Cow position: | chr7:26890417-26890776 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 7 |
| Conread position: | 363-719 |
| Cow position: | chr7:51013593-51013944 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 195, 130 |
| Conread position: | 372-701 |
| Cow position: | chr7:62680029-62679686 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 128, 139 |
| Conread position: | 382-731 |
| Cow position: | chr7:19925174-19924827 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 277, 7 |
| Conread position: | 383-725 |
| Cow position: | chr7:59136069-59136408 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 19 |
| Conread position: | 384-719 |
| Cow position: | chr7:36084972-36085312 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 211, 88 |
| Conread position: | 391-719 |
| Cow position: | chr7:1358028-1357706 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 90, 150 |
| Conread position: | 392-731 |
| Cow position: | chr7:38536167-38536505 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 100, 17 |
| Conread position: | 396-731 |
| Cow position: | chr7:45949498-45949163 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 11, 120 |
| Conread position: | 397-719 |
| Cow position: | chr7:21976084-21975762 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 262, 113 |
| Conread position: | 405-700 |
| Cow position: | chr7:51911692-51911397 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 106 |
| Conread position: | 433-716 |
| Cow position: | chr7:67811806-67812094 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 127 |
| Conread position: | 451-719 |
| Cow position: | chr7:993939-994211 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 183, 85 |
| Conread position: | 473-731 |
| Cow position: | chr7:23835849-23836109 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 140, 47 |
| Conread position: | 490-731 |
| Cow position: | chr7:6489564-6489323 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 169, 24 |
| Conread position: | 546-706 |
| Cow position: | chr7:3729776-3729938 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 58 |
Show alignments to all cow chromosomes.