Cow genome map
| Conread name: | Lng1-LNG010021B07 |
| Conread position: | 259-731 |
| Cow position: | chr8:19328647-19329130 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 259-731 |
| Cow position: | chr8:29441133-29440653 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 47 |
| Conread position: | 263-531 |
| Cow position: | chr8:38087822-38088097 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 263-628 |
| Cow position: | chr8:8596194-8595827 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 34, 252 |
| Conread position: | 263-704 |
| Cow position: | chr8:17310733-17311166 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 263-719 |
| Cow position: | chr8:4686092-4686555 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 263-719 |
| Cow position: | chr8:23770336-23770802 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-719 |
| Cow position: | chr8:33588074-33588541 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 263-719 |
| Cow position: | chr8:59263196-59262731 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-720 |
| Cow position: | chr8:50993492-50993951 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-725 |
| Cow position: | chr8:32319851-32319377 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-730 |
| Cow position: | chr8:60059901-60060377 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 263-731 |
| Cow position: | chr8:24916632-24916163 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr8:36636846-36636367 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr8:36637961-36637482 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 263-731 |
| Cow position: | chr8:45796042-45795569 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 263-731 |
| Cow position: | chr8:47662629-47662152 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 270-657 |
| Cow position: | chr8:33429621-33430012 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 10, 184 |
| Conread position: | 272-522 |
| Cow position: | chr8:5873341-5873602 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 87 |
| Conread position: | 272-727 |
| Cow position: | chr8:48370735-48371183 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 312 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 5, 82 |
| Conread position: | 283-731 |
| Cow position: | chr8:25522120-25522573 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 21 |
| Conread position: | 284-479 |
| Cow position: | chr8:14929306-14929107 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 39 |
| Conread position: | 284-528 |
| Cow position: | chr8:24421063-24420819 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 284-588 |
| Cow position: | chr8:25777153-25776848 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 42, 20 |
| Conread position: | 284-654 |
| Cow position: | chr8:42658737-42658371 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 209 |
| Conread position: | 284-700 |
| Cow position: | chr8:46633672-46633256 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 284-706 |
| Cow position: | chr8:12664302-12663870 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 263 |
| Conread position: | 284-719 |
| Cow position: | chr8:8316904-8316474 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 284-719 |
| Cow position: | chr8:8402478-8402039 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 284-719 |
| Cow position: | chr8:11055614-11056036 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 27, 115 |
| Conread position: | 284-725 |
| Cow position: | chr8:8904780-8904355 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 315 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 284-731 |
| Cow position: | chr8:8909958-8910394 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 42, 28 |
| Conread position: | 284-731 |
| Cow position: | chr8:13735369-13735822 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 236 |
| Conread position: | 284-731 |
| Cow position: | chr8:49214150-49214601 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 284-789 |
| Cow position: | chr8:9264546-9264060 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 136 |
| Conread position: | 285-647 |
| Cow position: | chr8:27924854-27925209 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 23 |
| Conread position: | 285-664 |
| Cow position: | chr8:61198393-61198014 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 19 |
| Conread position: | 285-716 |
| Cow position: | chr8:46222591-46222166 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 285-719 |
| Cow position: | chr8:44077302-44076859 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 297-743 |
| Cow position: | chr8:11800988-11801419 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 362, 33 |
| Conread position: | 298-731 |
| Cow position: | chr8:19050221-19050658 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 218 |
| Conread position: | 301-615 |
| Cow position: | chr8:13808076-13808376 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 61 |
| Conread position: | 302-600 |
| Cow position: | chr8:25542341-25542634 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 305-716 |
| Cow position: | chr8:44693055-44693452 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 64 |
| Conread position: | 305-719 |
| Cow position: | chr8:2171635-2171217 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 202 |
| Conread position: | 319-607 |
| Cow position: | chr8:8534261-8533998 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 259, 19 |
| Conread position: | 321-731 |
| Cow position: | chr8:53427096-53427502 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 323-716 |
| Cow position: | chr8:32632248-32631866 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 324-731 |
| Cow position: | chr8:26006998-26006593 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 325-505 |
| Cow position: | chr8:11831517-11831694 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 325-731 |
| Cow position: | chr8:44121634-44122053 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 207, 8 |
| Conread position: | 336-704 |
| Cow position: | chr8:19173987-19173622 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 80 |
| Conread position: | 336-719 |
| Cow position: | chr8:27984023-27983633 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 202 |
| Conread position: | 336-719 |
| Cow position: | chr8:42467182-42467541 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 331, 46 |
| Conread position: | 336-719 |
| Cow position: | chr8:45161572-45161202 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 323, 12 |
| Conread position: | 336-719 |
| Cow position: | chr8:47884809-47885196 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 264 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 310, 22 |
| Conread position: | 336-731 |
| Cow position: | chr8:3857234-3856840 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 337-731 |
| Cow position: | chr8:8518794-8518406 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 280, 142 |
| Conread position: | 341-716 |
| Cow position: | chr8:9540706-9540332 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 164 |
| Conread position: | 341-719 |
| Cow position: | chr8:8230001-8229619 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 163 |
| Conread position: | 341-731 |
| Cow position: | chr8:9274804-9275194 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 32, 164 |
| Conread position: | 341-731 |
| Cow position: | chr8:47070025-47069632 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 8 |
| Conread position: | 342-705 |
| Cow position: | chr8:11757506-11757852 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 304, 139 |
| Conread position: | 342-731 |
| Cow position: | chr8:8557345-8556973 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 247 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 31, 24 |
| Conread position: | 344-716 |
| Cow position: | chr8:45448239-45448608 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 355-693 |
| Cow position: | chr8:11970763-11970427 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 359-731 |
| Cow position: | chr8:45317319-45316953 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 32 |
| Conread position: | 359-731 |
| Cow position: | chr8:47670259-47670630 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 250, 151 |
| Conread position: | 373-684 |
| Cow position: | chr8:32930320-32930642 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 119, 170 |
| Conread position: | 407-700 |
| Cow position: | chr8:23216604-23216884 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 252, 103 |
| Conread position: | 407-731 |
| Cow position: | chr8:39196367-39196041 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 252, 103 |
| Conread position: | 435-719 |
| Cow position: | chr8:46091982-46091699 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 207, 75 |
| Conread position: | 439-716 |
| Cow position: | chr8:50289269-50288991 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 216, 57 |
| Conread position: | 466-715 |
| Cow position: | chr8:23766479-23766228 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 15, 22 |
Show alignments to all cow chromosomes.