Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               259-731
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               259-731
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 47
               

               Conread position:
               263-531
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-628
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               34, 252
               

               Conread position:
               263-704
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 123
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-720
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-725
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-730
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 53
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 41
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               270-657
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 184
               

               Conread position:
               272-522
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 87
               

               Conread position:
               272-727
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               312
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               283-731
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 21
               

               Conread position:
               284-479
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               284-528
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               73, 24
               

               Conread position:
               284-588
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-654
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 209
               

               Conread position:
               284-700
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               284-706
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 263
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               70, 24
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               284-719
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               307
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               27, 115
               

               Conread position:
               284-725
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               315
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 236
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 29
               

               Conread position:
               284-789
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 136
               

               Conread position:
               285-647
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 23
               

               Conread position:
               285-664
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               285-716
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               285-719
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               297-743
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               362, 33
               

               Conread position:
               298-731
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 218
               

               Conread position:
               301-615
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 61
               

               Conread position:
               302-600
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               305-716
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 64
               

               Conread position:
               305-719
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 202
               

               Conread position:
               319-607
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               259, 19
               

               Conread position:
               321-731
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 59
               

               Conread position:
               323-716
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               325-505
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               325-731
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               207, 8
               

               Conread position:
               336-704
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 80
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 202
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               331, 46
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               323, 12
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               310, 22
               

               Conread position:
               336-731
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               337-731
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               280, 142
               

               Conread position:
               341-716
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 164
               

               Conread position:
               341-719
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 163
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               32, 164
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 8
               

               Conread position:
               342-705
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               304, 139
               

               Conread position:
               342-731
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               344-716
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               257
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               54, 22
               

               Conread position:
               355-693
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               359-731
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               307, 32
               

               Conread position:
               359-731
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               259
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               250, 151
               

               Conread position:
               373-684
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               119, 170
               

               Conread position:
               407-700
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               252, 103
               

               Conread position:
               407-731
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               252, 103
               

               Conread position:
               435-719
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               207, 75
               

               Conread position:
               439-716
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               216, 57
               

               Conread position:
               466-715
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 22
               
Show alignments to all cow chromosomes.