Cow genome map

Conread name: Lng1-LNG010021B07

Conread position: 261-731
Cow position: chr9:29028874-29028402 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 243
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 394, 249

Conread position: 263-508
Cow position: chr9:3579602-3579360 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 171, 75

Conread position: 263-648
Cow position: chr9:51183360-51182972 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 263-664
Cow position: chr9:18510375-18509969 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 263-690
Cow position: chr9:6831195-6830764 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 290
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 45

Conread position: 263-719
Cow position: chr9:9012456-9012919 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 263-719
Cow position: chr9:29629399-29628932 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 45

Conread position: 263-719
Cow position: chr9:37971860-37971392 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 257

Conread position: 263-730
Cow position: chr9:1996564-1996087 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 312
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 19, 45

Conread position: 263-731
Cow position: chr9:3548822-3548346 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 45

Conread position: 263-731
Cow position: chr9:16175116-16175594 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 42

Conread position: 263-731
Cow position: chr9:27034058-27034533 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 263-731
Cow position: chr9:28020895-28021375 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 263-731
Cow position: chr9:31806888-31807360 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 263-731
Cow position: chr9:42309030-42309509 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 263-731
Cow position: chr9:59456250-59455772 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 44

Conread position: 263-734
Cow position: chr9:42568221-42568700 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 265-592
Cow position: chr9:2493259-2492938 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 208
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 299, 90

Conread position: 272-604
Cow position: chr9:12373275-12373611 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 217
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 94, 69

Conread position: 281-725
Cow position: chr9:3868129-3867682 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 116

Conread position: 282-518
Cow position: chr9:42904304-42904065 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 42

Conread position: 284-402
Cow position: chr9:26103213-26103094 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 58

Conread position: 284-446
Cow position: chr9:26237498-26237653 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 79

Conread position: 284-498
Cow position: chr9:4027710-4027491 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 284-508
Cow position: chr9:14962056-14961826 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 77

Conread position: 284-557
Cow position: chr9:10855572-10855848 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 20

Conread position: 284-651
Cow position: chr9:2199489-2199849 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 42, 13

Conread position: 284-665
Cow position: chr9:31776337-31776704 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 60

Conread position: 284-704
Cow position: chr9:64118235-64118631 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 284-707
Cow position: chr9:5003386-5003815 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 284-713
Cow position: chr9:4984149-4984577 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 140

Conread position: 284-713
Cow position: chr9:6973546-6973961 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 284-716
Cow position: chr9:20310345-20309920 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 312
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 28, 132

Conread position: 284-720
Cow position: chr9:418154-417715 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 284-731
Cow position: chr9:37163434-37162981 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 284-731
Cow position: chr9:55616726-55617165 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 286
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 90

Conread position: 284-731
Cow position: chr9:59483291-59482846 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 14

Conread position: 284-731
Cow position: chr9:59535478-59535924 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 284-733
Cow position: chr9:2051836-2052282 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 196

Conread position: 284-759
Cow position: chr9:30671744-30672220 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 20

Conread position: 285-684
Cow position: chr9:6756949-6757352 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 75

Conread position: 286-731
Cow position: chr9:47001588-47002029 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 299
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 40, 18

Conread position: 298-647
Cow position: chr9:50788956-50789304 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 188

Conread position: 303-725
Cow position: chr9:59425115-59425506 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 54

Conread position: 305-453
Cow position: chr9:35657385-35657535 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 305-731
Cow position: chr9:3938389-3937964 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 85

Conread position: 324-648
Cow position: chr9:3006856-3006535 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 14, 167

Conread position: 324-716
Cow position: chr9:16267777-16268173 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 44

Conread position: 324-731
Cow position: chr9:164074-163664 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 44

Conread position: 324-731
Cow position: chr9:25483288-25483700 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 271
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 14, 44

Conread position: 327-731
Cow position: chr9:45872773-45873175 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 185

Conread position: 329-737
Cow position: chr9:2488542-2488139 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 269
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 9, 148

Conread position: 330-647
Cow position: chr9:2629948-2630255 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 148, 38

Conread position: 333-730
Cow position: chr9:4531921-4532320 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 266
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 261, 100

Conread position: 335-725
Cow position: chr9:26712885-26712497 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 15

Conread position: 336-704
Cow position: chr9:10321251-10321622 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 175

Conread position: 336-719
Cow position: chr9:39992374-39992734 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 287, 100

Conread position: 336-719
Cow position: chr9:59174727-59174342 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 258
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 278, 174

Conread position: 341-731
Cow position: chr9:1076762-1076372 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 266
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 25

Conread position: 341-731
Cow position: chr9:4672044-4672434 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 14

Conread position: 341-731
Cow position: chr9:27933529-27933921 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 169

Conread position: 341-731
Cow position: chr9:34243163-34242771 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 169

Conread position: 341-731
Cow position: chr9:46626362-46625972 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 14

Conread position: 341-734
Cow position: chr9:7001989-7002381 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 169

Conread position: 342-702
Cow position: chr9:2185393-2185759 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 44

Conread position: 342-719
Cow position: chr9:52570109-52570474 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 120

Conread position: 342-731
Cow position: chr9:60278587-60278195 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 167

Conread position: 344-724
Cow position: chr9:1252532-1252146 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 254
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 22

Conread position: 345-716
Cow position: chr9:223091-222737 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 312, 54

Conread position: 355-717
Cow position: chr9:8166554-8166205 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 122, 44

Conread position: 355-731
Cow position: chr9:31020256-31020635 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 152, 11

Conread position: 359-627
Cow position: chr9:3585756-3586020 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 151, 0

Conread position: 359-731
Cow position: chr9:37130091-37129710 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 11

Conread position: 361-715
Cow position: chr9:830097-829749 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 79

Conread position: 361-715
Cow position: chr9:831971-831623 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 79

Conread position: 366-645
Cow position: chr9:22702393-22702115 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 69, 58

Conread position: 372-716
Cow position: chr9:36723969-36724313 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 237
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 245, 121

Conread position: 373-731
Cow position: chr9:59443322-59443679 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 130, 154

Conread position: 375-729
Cow position: chr9:28677444-28677800 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 242, 114

Conread position: 382-610
Cow position: chr9:7062630-7062404 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 220, 128

Conread position: 384-719
Cow position: chr9:28626550-28626226 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 126, 0

Conread position: 385-696
Cow position: chr9:15071994-15072308 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 274, 125

Conread position: 386-710
Cow position: chr9:18836266-18836584 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 389-719
Cow position: chr9:3567370-3567038 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 270, 121

Conread position: 390-719
Cow position: chr9:34107235-34106905 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 205, 146

Conread position: 392-651
Cow position: chr9:7646715-7646462 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 167
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 402-732
Cow position: chr9:22650651-22650984 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 253, 108

Conread position: 406-713
Cow position: chr9:1979447-1979748 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 89

Conread position: 421-834
Cow position: chr9:3024628-3025019 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 279
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 233, 71

Conread position: 537-731
Cow position: chr9:8969295-8969099 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 122, 59

Show alignments to all cow chromosomes.