Cow genome map


           Conread name:
           Lng1-LNG010021B07
        

               Conread position:
               261-731
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               394, 249
               

               Conread position:
               263-508
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               171, 75
               

               Conread position:
               263-648
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               263-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               263-690
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               263-719
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 257
               

               Conread position:
               263-730
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               312
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               263-731
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 44
               

               Conread position:
               263-734
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               265-592
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               299, 90
               

               Conread position:
               272-604
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               94, 69
               

               Conread position:
               281-725
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 116
               

               Conread position:
               282-518
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               284-402
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 58
               

               Conread position:
               284-446
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 79
               

               Conread position:
               284-498
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               284-508
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               284-557
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-651
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               284-665
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               284-704
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               284-707
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-713
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               284-713
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               284-716
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               312
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               284-720
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 90
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               284-731
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               284-733
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 196
               

               Conread position:
               284-759
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               285-684
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               286-731
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               299
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               298-647
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               18, 188
               

               Conread position:
               303-725
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               305-453
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               305-731
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               324-648
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               324-716
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               324-731
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               14, 44
               

               Conread position:
               327-731
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 185
               

               Conread position:
               329-737
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 148
               

               Conread position:
               330-647
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               148, 38
               

               Conread position:
               333-730
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               261, 100
               

               Conread position:
               335-725
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               336-704
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 175
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               287, 100
               

               Conread position:
               336-719
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               258
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               278, 174
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               266
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 14
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 169
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 169
               

               Conread position:
               341-731
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 14
               

               Conread position:
               341-734
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               318, 169
               

               Conread position:
               342-702
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               113, 44
               

               Conread position:
               342-719
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 120
               

               Conread position:
               342-731
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 167
               

               Conread position:
               344-724
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               345-716
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               312, 54
               

               Conread position:
               355-717
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               122, 44
               

               Conread position:
               355-731
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               152, 11
               

               Conread position:
               359-627
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               359-731
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               361-715
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               361-715
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               366-645
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               69, 58
               

               Conread position:
               372-716
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               237
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               245, 121
               

               Conread position:
               373-731
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               130, 154
               

               Conread position:
               375-729
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               242, 114
               

               Conread position:
               382-610
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               220, 128
               

               Conread position:
               384-719
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               385-696
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               274, 125
               

               Conread position:
               386-710
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               389-719
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               270, 121
               

               Conread position:
               390-719
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               205, 146
               

               Conread position:
               392-651
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               402-732
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               253, 108
               

               Conread position:
               406-713
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               77, 89
               

               Conread position:
               421-834
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               233, 71
               

               Conread position:
               537-731
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 59
               
Show alignments to all cow chromosomes.