Cow genome map
| Conread name: | Lng1-LNG010026B02 |
| Conread position: | 256-811 |
| Cow position: | chr17:14932270-14932827 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 456 |
| Conread position: | 568-811 |
| Cow position: | chr17:5546003-5546245 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 176, 23 |
| Conread position: | 616-807 |
| Cow position: | chr17:5043359-5043549 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 53 |
| Conread position: | 616-811 |
| Cow position: | chr17:6612258-6612062 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr17:15708757-15708953 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr17:17957833-17957637 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 124, 95 |
| Conread position: | 616-811 |
| Cow position: | chr17:18777594-18777790 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 126, 95 |
| Conread position: | 616-811 |
| Cow position: | chr17:20391010-20390814 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 617-779 |
| Cow position: | chr17:2179078-2178920 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 123, 52 |
| Conread position: | 617-807 |
| Cow position: | chr17:11032384-11032195 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 127, 62 |
| Conread position: | 617-811 |
| Cow position: | chr17:36817110-36816927 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 147, 62 |
| Conread position: | 617-811 |
| Cow position: | chr17:37415653-37415848 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 94 |
| Conread position: | 618-780 |
| Cow position: | chr17:38829115-38828954 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 129, 50 |
| Conread position: | 618-787 |
| Cow position: | chr17:5380185-5380019 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 121, 101 |
| Conread position: | 618-801 |
| Cow position: | chr17:2839256-2839075 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 151 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 143, 91 |
| Conread position: | 618-805 |
| Cow position: | chr17:8205185-8204992 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 61, 106 |
| Conread position: | 618-810 |
| Cow position: | chr17:2698789-2698594 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 618-811 |
| Cow position: | chr17:1568986-1569174 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 137, 93 |
| Conread position: | 618-811 |
| Cow position: | chr17:2078873-2078683 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 122, 55 |
| Conread position: | 618-811 |
| Cow position: | chr17:4635541-4635735 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 126, 93 |
| Conread position: | 618-811 |
| Cow position: | chr17:16118231-16118419 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 46 |
| Conread position: | 618-811 |
| Cow position: | chr17:17221547-17221355 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 146, 93 |
| Conread position: | 618-811 |
| Cow position: | chr17:18198588-18198394 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 124, 94 |
| Conread position: | 618-811 |
| Cow position: | chr17:20055356-20055167 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 618-811 |
| Cow position: | chr17:29471671-29471479 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 140, 88 |
| Conread position: | 618-811 |
| Cow position: | chr17:29897873-29897683 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 166, 29 |
| Conread position: | 619-779 |
| Cow position: | chr17:7615447-7615615 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 619-811 |
| Cow position: | chr17:138841-138648 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 619-811 |
| Cow position: | chr17:4085300-4085107 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 121, 93 |
| Conread position: | 619-811 |
| Cow position: | chr17:9753019-9752830 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 126, 54 |
| Conread position: | 619-811 |
| Cow position: | chr17:14249873-14250068 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 62, 102 |
| Conread position: | 619-811 |
| Cow position: | chr17:22563377-22563185 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 147, 65 |
| Conread position: | 619-811 |
| Cow position: | chr17:42247631-42247810 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 50 |
| Conread position: | 620-811 |
| Cow position: | chr17:1311532-1311722 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 121, 7 |
| Conread position: | 620-811 |
| Cow position: | chr17:44865081-44865268 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 622-794 |
| Cow position: | chr17:29041671-29041842 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 139, 87 |
| Conread position: | 622-808 |
| Cow position: | chr17:14871913-14871726 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-808 |
| Cow position: | chr17:15374624-15374448 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 21 |
| Conread position: | 622-808 |
| Cow position: | chr17:16854868-16855054 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:184377-184187 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 117, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:1970381-1970191 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:2265418-2265229 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 122, 88 |
| Conread position: | 622-811 |
| Cow position: | chr17:2583622-2583432 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:4676657-4676467 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 117, 90 |
| Conread position: | 622-811 |
| Cow position: | chr17:5806259-5806449 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:6071771-6071575 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 622-811 |
| Cow position: | chr17:6123013-6122823 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:6263085-6262896 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 120, 56 |
| Conread position: | 622-811 |
| Cow position: | chr17:8222935-8222745 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:11083905-11084095 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:14029117-14029306 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 119, 86 |
| Conread position: | 622-811 |
| Cow position: | chr17:14243056-14242869 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:15140109-15140299 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 123, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:15328511-15328321 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:15439021-15438831 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:15809217-15809027 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:15853965-15853774 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:17128235-17128045 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:18099844-18100034 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:20078447-20078627 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 141, 56 |
| Conread position: | 622-811 |
| Cow position: | chr17:20209651-20209841 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 622-811 |
| Cow position: | chr17:20546367-20546177 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:21666229-21666044 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 119, 70 |
| Conread position: | 622-811 |
| Cow position: | chr17:23321190-23321376 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 118, 77 |
| Conread position: | 622-811 |
| Cow position: | chr17:24026753-24026943 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:24785420-24785230 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:27791558-27791742 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 622-811 |
| Cow position: | chr17:28024672-28024862 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:29824730-29824921 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 622-811 |
| Cow position: | chr17:29950442-29950255 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 142, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:30182351-30182540 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 118, 20 |
| Conread position: | 622-811 |
| Cow position: | chr17:34236021-34236211 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:38991982-38991793 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr17:40810981-40810791 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 624-811 |
| Cow position: | chr17:5638660-5638849 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 624-811 |
| Cow position: | chr17:5672288-5672477 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 626-808 |
| Cow position: | chr17:1784314-1784498 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 626-808 |
| Cow position: | chr17:43991722-43991531 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 642-811 |
| Cow position: | chr17:731282-731451 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 99, 67 |
| Conread position: | 643-811 |
| Cow position: | chr17:14865175-14865344 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 650-807 |
| Cow position: | chr17:10270151-10270308 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 652-811 |
| Cow position: | chr17:24292830-24292676 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 664-811 |
| Cow position: | chr17:41014073-41013925 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 80, 46 |
| Conread position: | 675-811 |
| Cow position: | chr17:34000206-34000340 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 43 |
Show alignments to all cow chromosomes.