Cow genome map
| Conread name: | Lng1-LNG010026B02 |
| Conread position: | 616-811 |
| Cow position: | chr18:37582999-37583194 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 124, 56 |
| Conread position: | 618-757 |
| Cow position: | chr18:36122405-36122544 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 94 |
| Conread position: | 618-775 |
| Cow position: | chr18:11778792-11778638 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 55 |
| Conread position: | 618-802 |
| Cow position: | chr18:17335284-17335468 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 102 |
| Conread position: | 618-807 |
| Cow position: | chr18:33607685-33607502 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 126, 21 |
| Conread position: | 618-808 |
| Cow position: | chr18:6103947-6104137 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 618-808 |
| Cow position: | chr18:23659438-23659628 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 156 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 124, 62 |
| Conread position: | 618-808 |
| Cow position: | chr18:36187936-36188124 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 128, 93 |
| Conread position: | 618-808 |
| Cow position: | chr18:42080567-42080750 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 157 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 123, 27 |
| Conread position: | 618-811 |
| Cow position: | chr18:1022565-1022756 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 93 |
| Conread position: | 618-811 |
| Cow position: | chr18:33522675-33522490 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 147, 42 |
| Conread position: | 618-811 |
| Cow position: | chr18:36512091-36511897 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 93 |
| Conread position: | 618-811 |
| Cow position: | chr18:43129544-43129353 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 136, 23 |
| Conread position: | 618-811 |
| Cow position: | chr18:53872349-53872156 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 129, 91 |
| Conread position: | 619-808 |
| Cow position: | chr18:23716207-23716394 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 61 |
| Conread position: | 619-808 |
| Cow position: | chr18:36648851-36648671 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 50 |
| Conread position: | 622-754 |
| Cow position: | chr18:20151060-20150930 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 622-803 |
| Cow position: | chr18:17096260-17096081 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 622-808 |
| Cow position: | chr18:2296650-2296838 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-808 |
| Cow position: | chr18:10221231-10221418 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-808 |
| Cow position: | chr18:14479536-14479350 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 119, 27 |
| Conread position: | 622-808 |
| Cow position: | chr18:27990210-27990023 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 622-808 |
| Cow position: | chr18:40195565-40195379 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-810 |
| Cow position: | chr18:52698723-52698537 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 58 |
| Conread position: | 622-811 |
| Cow position: | chr18:603011-603201 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:5536426-5536235 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 622-811 |
| Cow position: | chr18:11869940-11869750 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 121, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:14127833-14128023 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:16094338-16094148 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:16173160-16173350 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:17943965-17943775 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:18215560-18215750 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:19355966-19355776 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:22412844-22412644 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 622-811 |
| Cow position: | chr18:23688625-23688435 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:23701350-23701535 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 622-811 |
| Cow position: | chr18:24037393-24037583 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:24619876-24619692 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 118, 28 |
| Conread position: | 622-811 |
| Cow position: | chr18:25354974-25354780 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 97 |
| Conread position: | 622-811 |
| Cow position: | chr18:25972613-25972797 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 622-811 |
| Cow position: | chr18:26243005-26243195 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:27539885-27539695 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:28084500-28084310 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 123, 97 |
| Conread position: | 622-811 |
| Cow position: | chr18:28968836-28969026 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:29071874-29071684 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:29079190-29079000 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:29767884-29767692 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 59, 101 |
| Conread position: | 622-811 |
| Cow position: | chr18:29863151-29863341 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:30607149-30606959 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:31139205-31139015 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:32164478-32164668 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:32436648-32436838 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 98 |
| Conread position: | 622-811 |
| Cow position: | chr18:33272087-33271901 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 622-811 |
| Cow position: | chr18:36776729-36776539 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 121, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:37509415-37509231 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 119, 80 |
| Conread position: | 622-811 |
| Cow position: | chr18:40484452-40484263 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 119, 27 |
| Conread position: | 622-811 |
| Cow position: | chr18:41837637-41837827 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:50092991-50093181 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:50834932-50835122 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:51602212-51602402 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:51690250-51690060 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:54033161-54032981 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 120, 84 |
| Conread position: | 622-811 |
| Cow position: | chr18:54047332-54047142 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr18:55554704-55554514 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 623-806 |
| Cow position: | chr18:4889964-4889785 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 623-811 |
| Cow position: | chr18:26844630-26844818 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 623-811 |
| Cow position: | chr18:32280423-32280236 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 624-811 |
| Cow position: | chr18:52629807-52629995 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 17 |
| Conread position: | 647-811 |
| Cow position: | chr18:35443940-35444105 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 93, 64 |
| Conread position: | 655-811 |
| Cow position: | chr18:29946881-29946721 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 68, 110 |
| Conread position: | 661-811 |
| Cow position: | chr18:17381227-17381076 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 50 |
Show alignments to all cow chromosomes.