Cow genome map
| Conread name: | Lng1-LNG010026B02 |
| Conread position: | 129-544 |
| Cow position: | chr24:23960904-23961328 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 79, 22 |
| Conread position: | 616-811 |
| Cow position: | chr24:11208156-11208352 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr24:17764153-17764344 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 616-811 |
| Cow position: | chr24:26274183-26274370 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 132, 53 |
| Conread position: | 616-811 |
| Cow position: | chr24:38296507-38296311 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr24:40552070-40551880 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 124, 34 |
| Conread position: | 617-772 |
| Cow position: | chr24:42944215-42944362 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 123, 75 |
| Conread position: | 618-747 |
| Cow position: | chr24:39258294-39258171 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 618-764 |
| Cow position: | chr24:30765772-30765626 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 103 |
| Conread position: | 618-801 |
| Cow position: | chr24:36404767-36404587 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 126, 70 |
| Conread position: | 618-805 |
| Cow position: | chr24:9071398-9071580 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 143, 55 |
| Conread position: | 618-807 |
| Cow position: | chr24:36556138-36556320 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 123, 73 |
| Conread position: | 618-808 |
| Cow position: | chr24:14745809-14745622 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 128, 99 |
| Conread position: | 618-809 |
| Cow position: | chr24:28601581-28601767 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 618-811 |
| Cow position: | chr24:14376193-14376388 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 618-811 |
| Cow position: | chr24:15372224-15372035 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 143, 91 |
| Conread position: | 618-811 |
| Cow position: | chr24:25285207-25285014 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 618-811 |
| Cow position: | chr24:27148552-27148360 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 126, 80 |
| Conread position: | 618-811 |
| Cow position: | chr24:32608760-32608566 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 123, 93 |
| Conread position: | 618-811 |
| Cow position: | chr24:33122375-33122182 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 158 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 125, 101 |
| Conread position: | 618-811 |
| Cow position: | chr24:36721893-36721699 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 122, 94 |
| Conread position: | 619-808 |
| Cow position: | chr24:36726602-36726414 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 125, 23 |
| Conread position: | 619-811 |
| Cow position: | chr24:11462558-11462756 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 619-811 |
| Cow position: | chr24:38641819-38641630 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 23 |
| Conread position: | 619-811 |
| Cow position: | chr24:40347624-40347818 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 621-811 |
| Cow position: | chr24:6035735-6035926 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 120, 90 |
| Conread position: | 622-771 |
| Cow position: | chr24:39680939-39680790 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 119, 98 |
| Conread position: | 622-787 |
| Cow position: | chr24:30893423-30893585 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 622-805 |
| Cow position: | chr24:12203071-12203250 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 122, 58 |
| Conread position: | 622-805 |
| Cow position: | chr24:31648551-31648733 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 142, 85 |
| Conread position: | 622-807 |
| Cow position: | chr24:16558835-16559020 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:1841427-1841617 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:3793927-3793737 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:5279657-5279467 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:5862910-5863098 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:5929224-5929034 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:6020633-6020823 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 125, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:6325928-6326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 121, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:7749071-7748881 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:7960071-7960261 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:8607774-8607584 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:11104707-11104897 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:13235711-13235524 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 126, 87 |
| Conread position: | 622-811 |
| Cow position: | chr24:13374069-13374259 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 622-811 |
| Cow position: | chr24:13496729-13496539 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:14146724-14146910 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 142, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:14760338-14760147 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:15296560-15296370 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:16081042-16081232 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:17161533-17161723 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:18223036-18223225 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:18267041-18267231 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 125, 97 |
| Conread position: | 622-811 |
| Cow position: | chr24:20604194-20604004 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:22047624-22047814 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 124, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:22954007-22953817 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:22975252-22975063 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 119, 46 |
| Conread position: | 622-811 |
| Cow position: | chr24:25372548-25372358 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:26388448-26388638 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:26412492-26412306 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 139, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:26847161-26847348 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 139, 110 |
| Conread position: | 622-811 |
| Cow position: | chr24:29190728-29190543 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:30681688-30681867 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 622-811 |
| Cow position: | chr24:31067600-31067790 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:35067337-35067522 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:36036382-36036571 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:36779716-36779526 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:38814090-38813902 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 98 |
| Conread position: | 622-811 |
| Cow position: | chr24:40272292-40272102 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:40428249-40428439 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:40466968-40467158 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr24:41005922-41005733 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 623-811 |
| Cow position: | chr24:6524441-6524252 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 123, 88 |
| Conread position: | 623-811 |
| Cow position: | chr24:12332264-12332452 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 119, 57 |
| Conread position: | 623-811 |
| Cow position: | chr24:23052443-23052633 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 118, 86 |
| Conread position: | 627-811 |
| Cow position: | chr24:39501152-39501338 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 114, 91 |
| Conread position: | 644-807 |
| Cow position: | chr24:6079849-6079684 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 67 |
| Conread position: | 645-811 |
| Cow position: | chr24:35568410-35568252 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 650-811 |
| Cow position: | chr24:19688164-19688324 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 114, 61 |
| Conread position: | 655-807 |
| Cow position: | chr24:29131019-29131170 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 87, 40 |
| Conread position: | 655-811 |
| Cow position: | chr24:9546584-9546427 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 85, 56 |
Show alignments to all cow chromosomes.