Cow genome map
| Conread name: | Lng1-LNG010026B02 |
| Conread position: | 607-811 |
| Cow position: | chr25:3172242-3172447 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 615-807 |
| Cow position: | chr25:10012913-10013105 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 105 |
| Conread position: | 616-808 |
| Cow position: | chr25:19367545-19367740 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 61, 95 |
| Conread position: | 616-811 |
| Cow position: | chr25:7223284-7223480 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr25:11124914-11124718 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 124, 95 |
| Conread position: | 616-811 |
| Cow position: | chr25:18490212-18490018 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 616-811 |
| Cow position: | chr25:26705734-26705930 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr25:29525719-29525915 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr25:31073448-31073644 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr25:34668096-34667896 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 616-811 |
| Cow position: | chr25:35372465-35372661 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr25:35571967-35571771 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 128, 95 |
| Conread position: | 616-811 |
| Cow position: | chr25:35589225-35589030 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 128, 68 |
| Conread position: | 618-794 |
| Cow position: | chr25:23366810-23366636 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 618-801 |
| Cow position: | chr25:20075622-20075442 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 126, 71 |
| Conread position: | 618-807 |
| Cow position: | chr25:12082205-12082390 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 123, 51 |
| Conread position: | 618-807 |
| Cow position: | chr25:17562186-17562004 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 618-807 |
| Cow position: | chr25:30811070-30810886 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 123, 77 |
| Conread position: | 618-808 |
| Cow position: | chr25:13941588-13941783 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 618-808 |
| Cow position: | chr25:41098052-41098236 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 618-811 |
| Cow position: | chr25:2516148-2515960 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 62 |
| Conread position: | 618-811 |
| Cow position: | chr25:10633864-10634054 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 122, 85 |
| Conread position: | 618-811 |
| Cow position: | chr25:11955977-11955783 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 123, 101 |
| Conread position: | 618-811 |
| Cow position: | chr25:12756274-12756472 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 72, 100 |
| Conread position: | 618-811 |
| Cow position: | chr25:18452447-18452254 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 23 |
| Conread position: | 618-811 |
| Cow position: | chr25:29313175-29313367 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 144, 19 |
| Conread position: | 618-811 |
| Cow position: | chr25:37648564-37648384 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 122, 32 |
| Conread position: | 619-808 |
| Cow position: | chr25:2594907-2594727 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 142, 50 |
| Conread position: | 619-811 |
| Cow position: | chr25:23999044-23999231 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 125, 86 |
| Conread position: | 622-788 |
| Cow position: | chr25:24228196-24228360 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 139, 72 |
| Conread position: | 622-807 |
| Cow position: | chr25:27231501-27231315 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-807 |
| Cow position: | chr25:34343765-34343950 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 119, 97 |
| Conread position: | 622-808 |
| Cow position: | chr25:29357870-29358057 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-808 |
| Cow position: | chr25:41356655-41356842 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 622-811 |
| Cow position: | chr25:6955210-6955020 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 125, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:11043761-11043573 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 142, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:12939065-12939255 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:13429970-13430157 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 134, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:13787116-13786926 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:14756269-14756457 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 90 |
| Conread position: | 622-811 |
| Cow position: | chr25:17585880-17586068 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 139, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:18330633-18330824 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 90 |
| Conread position: | 622-811 |
| Cow position: | chr25:18474340-18474159 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 139, 58 |
| Conread position: | 622-811 |
| Cow position: | chr25:18886339-18886529 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:19139430-19139620 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:19337183-19337373 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:19923663-19923479 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 122, 74 |
| Conread position: | 622-811 |
| Cow position: | chr25:20633902-20633713 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 622-811 |
| Cow position: | chr25:22151247-22151057 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:23361628-23361442 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 135, 96 |
| Conread position: | 622-811 |
| Cow position: | chr25:23394011-23393824 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 122, 47 |
| Conread position: | 622-811 |
| Cow position: | chr25:24303124-24303313 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 118, 96 |
| Conread position: | 622-811 |
| Cow position: | chr25:24655032-24655217 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 142, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:25480464-25480646 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 29 |
| Conread position: | 622-811 |
| Cow position: | chr25:25510032-25509825 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 622-811 |
| Cow position: | chr25:26282166-26281977 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 119, 46 |
| Conread position: | 622-811 |
| Cow position: | chr25:26850075-26850263 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 121, 21 |
| Conread position: | 622-811 |
| Cow position: | chr25:27019096-27019285 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 142, 98 |
| Conread position: | 622-811 |
| Cow position: | chr25:28275526-28275714 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 137, 84 |
| Conread position: | 622-811 |
| Cow position: | chr25:28863014-28862824 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 120, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:32577520-32577710 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 122, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:33838527-33838335 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 55, 99 |
| Conread position: | 622-811 |
| Cow position: | chr25:34164420-34164609 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 622-811 |
| Cow position: | chr25:34503080-34503270 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 119, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:34509037-34509227 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 118, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:35553809-35553622 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 122, 97 |
| Conread position: | 622-811 |
| Cow position: | chr25:35755102-35755291 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 120, 25 |
| Conread position: | 622-811 |
| Cow position: | chr25:36350880-36350692 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 142, 89 |
| Conread position: | 622-811 |
| Cow position: | chr25:39386687-39386877 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 97 |
| Conread position: | 622-811 |
| Cow position: | chr25:41135606-41135791 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 119, 26 |
| Conread position: | 623-811 |
| Cow position: | chr25:4372551-4372738 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 624-811 |
| Cow position: | chr25:32610280-32610468 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 116, 87 |
| Conread position: | 627-811 |
| Cow position: | chr25:13960204-13960019 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 632-811 |
| Cow position: | chr25:8655424-8655242 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 79 |
| Conread position: | 632-811 |
| Cow position: | chr25:27076019-27076199 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 111, 79 |
| Conread position: | 632-811 |
| Cow position: | chr25:29802613-29802793 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 112, 79 |
| Conread position: | 636-811 |
| Cow position: | chr25:11896746-11896570 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 105, 75 |
| Conread position: | 641-811 |
| Cow position: | chr25:21903573-21903402 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 645-811 |
| Cow position: | chr25:21949917-21949750 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 96, 66 |
| Conread position: | 646-811 |
| Cow position: | chr25:9957942-9958099 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 18 |
Show alignments to all cow chromosomes.