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Cow genome map

           
Conread name:
           
Lng1-LNG010026B02
        

               
Conread position:
               
84-811
               

               
Cow position:
               
chrX:30434914-30435643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
614, 628
               

               
Conread position:
               
615-811
               

               
Cow position:
               
chrX:24588562-24588759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
126, 96
               

               
Conread position:
               
616-808
               

               
Cow position:
               
chrX:16325356-16325552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
616-808
               

               
Cow position:
               
chrX:22819249-22819056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
131, 95
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:9763900-9764096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:16085487-16085683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
128, 95
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:24309929-24310124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 116
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:28058493-28058297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:29930221-29930417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:30964815-30965011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:32643657-32643461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
128, 95
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:33763316-33763120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
128, 95
               

               
Conread position:
               
616-811
               

               
Cow position:
               
chrX:34094877-34094681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
617-808
               

               
Cow position:
               
chrX:18455600-18455792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
130, 149
               

               
Conread position:
               
617-811
               

               
Cow position:
               
chrX:20800961-20800764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
617-811
               

               
Cow position:
               
chrX:27450879-27451070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
125, 84
               

               
Conread position:
               
617-811
               

               
Cow position:
               
chrX:30681334-30681524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
124, 92
               

               
Conread position:
               
618-747
               

               
Cow position:
               
chrX:40365576-40365706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
618-771
               

               
Cow position:
               
chrX:10301301-10301146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
618-779
               

               
Cow position:
               
chrX:150640-150487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
618-781
               

               
Cow position:
               
chrX:6044291-6044452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
138, 101
               

               
Conread position:
               
618-805
               

               
Cow position:
               
chrX:3155413-3155600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
618-805
               

               
Cow position:
               
chrX:15140367-15140550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
134, 73
               

               
Conread position:
               
618-805
               

               
Cow position:
               
chrX:25405203-25405389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
618-807
               

               
Cow position:
               
chrX:1617065-1617254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
135, 101
               

               
Conread position:
               
618-807
               

               
Cow position:
               
chrX:31804060-31803868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
618-808
               

               
Cow position:
               
chrX:6406522-6406334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
618-808
               

               
Cow position:
               
chrX:10445246-10445437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
618-808
               

               
Cow position:
               
chrX:25282325-25282515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
123, 94
               

               
Conread position:
               
618-808
               

               
Cow position:
               
chrX:34221934-34221736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
80, 152
               

               
Conread position:
               
618-808
               

               
Cow position:
               
chrX:39697932-39697744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:620095-620286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 91
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:4767864-4767671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:6201699-6201508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
143, 101
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:6235682-6235872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:11461827-11462018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:12310220-12310410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:12996741-12996935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
125, 101
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:20675037-20674843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:20999108-20999292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:22811059-22810864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
123, 88
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:24280089-24279892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
123, 93
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:26275307-26275114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:26755473-26755664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
123, 29
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:27071014-27070822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:29722401-29722186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:30089877-30090067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
106, 76
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:32329377-32329184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 51
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:33803826-33804011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
146, 92
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:38852330-38852138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
126, 101
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:41791546-41791744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
67, 94
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:41847361-41847553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
618-811
               

               
Cow position:
               
chrX:42222604-42222794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
619-802
               

               
Cow position:
               
chrX:11744435-11744254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
145, 49
               

               
Conread position:
               
619-811
               

               
Cow position:
               
chrX:2649180-2649375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
619-811
               

               
Cow position:
               
chrX:10438739-10438930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
619-811
               

               
Cow position:
               
chrX:12145267-12145074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
125, 92
               

               
Conread position:
               
619-811
               

               
Cow position:
               
chrX:26622653-26622833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
619-811
               

               
Cow position:
               
chrX:38999001-38998816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
619-811
               

               
Cow position:
               
chrX:40693561-40693757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
619-811
               

               
Cow position:
               
chrX:41734023-41734208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 31
               

               
Conread position:
               
621-811
               

               
Cow position:
               
chrX:5280686-5280877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 90
               

               
Conread position:
               
622-762
               

               
Cow position:
               
chrX:3406177-3406312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
622-772
               

               
Cow position:
               
chrX:21063638-21063489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
622-784
               

               
Cow position:
               
chrX:21254944-21254781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
622-805
               

               
Cow position:
               
chrX:18244150-18243974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
622-805
               

               
Cow position:
               
chrX:21833049-21832867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 74
               

               
Conread position:
               
622-807
               

               
Cow position:
               
chrX:4622788-4622974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-807
               

               
Cow position:
               
chrX:4905822-4906008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-807
               

               
Cow position:
               
chrX:12178839-12178653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-807
               

               
Cow position:
               
chrX:21818299-21818476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
622-807
               

               
Cow position:
               
chrX:24769691-24769877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-807
               

               
Cow position:
               
chrX:32145090-32145276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-808
               

               
Cow position:
               
chrX:5375112-5375299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
622-808
               

               
Cow position:
               
chrX:8590747-8590558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 90
               

               
Conread position:
               
622-808
               

               
Cow position:
               
chrX:16525955-16525768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-808
               

               
Cow position:
               
chrX:29288163-29287976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
622-808
               

               
Cow position:
               
chrX:40225075-40225256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
118, 67
               

               
Conread position:
               
622-808
               

               
Cow position:
               
chrX:46296826-46296640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
622-809
               

               
Cow position:
               
chrX:17782665-17782477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:671828-672018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:1550130-1549940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:2185390-2185201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
124, 97
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:2382632-2382441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
119, 98
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:2559795-2559985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:2579584-2579394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:3360986-3360796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:3372687-3372877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:3417971-3418161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:4342916-4342726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:5289519-5289709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
116, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:5427425-5427246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:5866311-5866121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:6372345-6372155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:6453862-6453672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:7096623-7096434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:7551636-7551826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:7572556-7572366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:7755071-7754881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:8482612-8482423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:8640953-8640763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:9128221-9128030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:9169449-9169630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:9227737-9227927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:9642267-9642457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:10059630-10059441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:10440661-10440856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:11976281-11976470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
63, 90
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:12307597-12307787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:13031486-13031675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:13206120-13205930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:13406121-13406311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:14050029-14050218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 76
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:14462480-14462295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:14801654-14801843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:15260454-15260640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:15621366-15621556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:15977788-15977978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:16040514-16040704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:16086958-16087148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 84
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:16359842-16360032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:16465466-16465282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
122, 74
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:16702836-16702646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:16711121-16710931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:17054733-17054543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:17290345-17290158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:17663751-17663939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
136, 97
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:17891711-17891521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 97
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:17994624-17994437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:18193855-18193665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:18488549-18488739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:18656640-18656830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 87
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:19398943-19398753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:21343560-21343370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:21389743-21389553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:21415032-21414842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:21582608-21582418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:21592456-21592268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
140, 58
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:21767965-21767775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:21793755-21793565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:22118329-22118519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:22493196-22493009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
142, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:22538868-22539058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:22612568-22612378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:22838437-22838247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:22869984-22869794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
117, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:22887825-22887637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:23038820-23039009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
120, 27
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:23280189-23280002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:23452280-23452472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
99, 83
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:23572652-23572842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:23986415-23986225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:24321462-24321653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:24346214-24346024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:24734832-24734639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:25289514-25289704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:26230593-26230783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:26531138-26530948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:27095294-27095112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:27305094-27304904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:27318396-27318206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:27754593-27754403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:27758874-27758684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:28503501-28503311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:28647105-28647295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:28879428-28879606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:29083232-29083042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:29099582-29099394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:29759853-29759665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
152, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:29880115-29880303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:29916180-29916371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:30060052-30059862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:30159825-30160014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:30172541-30172731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:30228948-30229137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:30455456-30455641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:30836552-30836362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:31202007-31201816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:31495901-31495712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:31978676-31978865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:33685296-33685106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:34761231-34761041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:36535566-36535754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:36729549-36729359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:37404069-37404254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:37852301-37852113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:38150853-38150664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:38231102-38231292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
119, 100
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:38961685-38961875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:39713716-39713526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:40184238-40184048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
119, 97
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:41156476-41156287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
622-811
               

               
Cow position:
               
chrX:42733037-42732847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
623-807
               

               
Cow position:
               
chrX:2048276-2048091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
124, 88
               

               
Conread position:
               
623-808
               

               
Cow position:
               
chrX:29942321-29942137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
117, 55
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chrX:2479464-2479653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 88
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chrX:2705185-2705376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 98
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chrX:10528622-10528809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chrX:11146168-11146359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chrX:21685783-21685594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
121, 88
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chrX:21750081-21750267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chrX:29912503-29912316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 88
               

               
Conread position:
               
623-811
               

               
Cow position:
               
chrX:39560494-39560684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
624-811
               

               
Cow position:
               
chrX:8435039-8435224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 87
               

               
Conread position:
               
624-811
               

               
Cow position:
               
chrX:20020742-20020556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 87
               

               
Conread position:
               
624-811
               

               
Cow position:
               
chrX:23387375-23387558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
624-811
               

               
Cow position:
               
chrX:23395770-23395582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
118, 87
               

               
Conread position:
               
626-808
               

               
Cow position:
               
chrX:41305067-41305251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
626-811
               

               
Cow position:
               
chrX:36691994-36691813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
114, 92
               

               
Conread position:
               
626-811
               

               
Cow position:
               
chrX:37815340-37815155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
627-811
               

               
Cow position:
               
chrX:3582095-3581912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
627-811
               

               
Cow position:
               
chrX:6655860-6656043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 80
               

               
Conread position:
               
627-811
               

               
Cow position:
               
chrX:9899178-9899361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
635-811
               

               
Cow position:
               
chrX:24928190-24928367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
641-807
               

               
Cow position:
               
chrX:5294200-5294368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
645-811
               

               
Cow position:
               
chrX:42010082-42009929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
646-811
               

               
Cow position:
               
chrX:2932861-2933027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
646-811
               

               
Cow position:
               
chrX:37488098-37487926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 79
               

               
Conread position:
               
650-811
               

               
Cow position:
               
chrX:8104370-8104531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
653-811
               

               
Cow position:
               
chrX:27595092-27595251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 58
               
Show alignments to all cow chromosomes.