Cow genome map
| Conread name: | Lng1-LNG010027C07 |
| Conread position: | 1-453 |
| Cow position: | chr3:64170976-64171441 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 35 |
| Conread position: | 1-454 |
| Cow position: | chr3:48240002-48240448 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 1-458 |
| Cow position: | chr3:56102492-56102939 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 1-458 |
| Cow position: | chr3:64684252-64683813 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 95 |
| Conread position: | 1-468 |
| Cow position: | chr3:3060608-3061061 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 3-450 |
| Cow position: | chr3:74848413-74847979 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 47 |
| Conread position: | 3-455 |
| Cow position: | chr3:20379969-20379520 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-470 |
| Cow position: | chr3:38095648-38096111 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 44 |
| Conread position: | 3-472 |
| Cow position: | chr3:2866907-2866441 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-472 |
| Cow position: | chr3:44926563-44927027 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 109 |
| Conread position: | 3-473 |
| Cow position: | chr3:227125-226672 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 105 |
| Conread position: | 3-473 |
| Cow position: | chr3:29574380-29573911 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 67 |
| Conread position: | 3-473 |
| Cow position: | chr3:49563758-49564231 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr3:66969132-66968664 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 3-475 |
| Cow position: | chr3:45692274-45691825 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 48 |
| Conread position: | 7-440 |
| Cow position: | chr3:46224650-46225076 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 61 |
| Conread position: | 21-476 |
| Cow position: | chr3:5951851-5951398 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 47 |
| Conread position: | 37-473 |
| Cow position: | chr3:64376926-64376496 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 50-472 |
| Cow position: | chr3:2921057-2921471 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 16 |
| Conread position: | 51-479 |
| Cow position: | chr3:24351509-24351914 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 66-473 |
| Cow position: | chr3:2790562-2790966 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 45 |
| Conread position: | 76-468 |
| Cow position: | chr3:55373911-55374291 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 35 |
| Conread position: | 112-475 |
| Cow position: | chr3:64317593-64317967 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 140 |
| Conread position: | 113-458 |
| Cow position: | chr3:15663583-15663244 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 84 |
| Conread position: | 147-453 |
| Cow position: | chr3:38862625-38862919 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 214, 30 |
| Conread position: | 158-473 |
| Cow position: | chr3:13312107-13311789 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 130 |
| Conread position: | 169-475 |
| Cow position: | chr3:54863714-54863403 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 174-475 |
| Cow position: | chr3:48272695-48272998 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 113 |
| Conread position: | 187-472 |
| Cow position: | chr3:41019385-41019100 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 100 |
| Conread position: | 200-473 |
| Cow position: | chr3:47986383-47986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 65 |
| Conread position: | 205-473 |
| Cow position: | chr3:36121122-36121390 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 82 |
| Conread position: | 230-473 |
| Cow position: | chr3:6785288-6785532 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 245-476 |
| Cow position: | chr3:19718272-19718050 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 248-468 |
| Cow position: | chr3:12673378-12673167 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 250-475 |
| Cow position: | chr3:68344333-68344119 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 263-452 |
| Cow position: | chr3:22352620-22352811 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 275-450 |
| Cow position: | chr3:62794060-62793881 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 283-453 |
| Cow position: | chr3:47341087-47340924 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 283-473 |
| Cow position: | chr3:46752873-46753061 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 288-458 |
| Cow position: | chr3:3885168-3884999 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 297-458 |
| Cow position: | chr3:16657829-16657669 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 303-478 |
| Cow position: | chr3:55895001-55895175 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 13 |
| Conread position: | 326-462 |
| Cow position: | chr3:64024965-64024828 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 341-476 |
| Cow position: | chr3:42602739-42602874 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 132, 111 |
Show alignments to all cow chromosomes.