Cow genome map
| Conread name: | Lng1-LNG010027C07 |
| Conread position: | 1-450 |
| Cow position: | chr5:40791495-40791933 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 13 |
| Conread position: | 1-450 |
| Cow position: | chr5:63312864-63312421 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 1-468 |
| Cow position: | chr5:57984190-57983728 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 108 |
| Conread position: | 1-475 |
| Cow position: | chr5:48534507-48534974 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 109 |
| Conread position: | 3-465 |
| Cow position: | chr5:5105878-5106336 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 108 |
| Conread position: | 3-472 |
| Cow position: | chr5:52823553-52823088 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr5:10543017-10542550 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 3-473 |
| Cow position: | chr5:46779170-46779636 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 42 |
| Conread position: | 3-473 |
| Cow position: | chr5:51166653-51166189 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 52 |
| Conread position: | 3-473 |
| Cow position: | chr5:58191568-58192038 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 3-473 |
| Cow position: | chr5:58198664-58199130 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 3-473 |
| Cow position: | chr5:72856527-72856994 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 5-469 |
| Cow position: | chr5:4349340-4348874 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 5-473 |
| Cow position: | chr5:2976441-2976906 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 31-456 |
| Cow position: | chr5:48575133-48574720 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 77 |
| Conread position: | 58-450 |
| Cow position: | chr5:6986777-6986388 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 53 |
| Conread position: | 70-450 |
| Cow position: | chr5:31634141-31634535 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 41 |
| Conread position: | 84-472 |
| Cow position: | chr5:11357860-11358245 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 26 |
| Conread position: | 140-450 |
| Cow position: | chr5:17026864-17027174 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 148 |
| Conread position: | 142-447 |
| Cow position: | chr5:25912521-25912814 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 147 |
| Conread position: | 172-468 |
| Cow position: | chr5:18491225-18491521 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 116 |
| Conread position: | 230-447 |
| Cow position: | chr5:26096167-26096377 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 116, 39 |
| Conread position: | 276-458 |
| Cow position: | chr5:43991205-43991387 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 287-473 |
| Cow position: | chr5:2704629-2704432 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 294-462 |
| Cow position: | chr5:6576652-6576484 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-474 |
| Cow position: | chr5:27613195-27613359 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 334-453 |
| Cow position: | chr5:57936142-57936022 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 334-472 |
| Cow position: | chr5:26073806-26073667 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 352-473 |
| Cow position: | chr5:35207241-35207362 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.