Cow genome map
| Conread name: | Lng1-LNG010027C07 |
| Conread position: | 1-450 |
| Cow position: | chr6:42615891-42616333 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 1-458 |
| Cow position: | chr6:15924799-15924351 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 1-469 |
| Cow position: | chr6:11193801-11193332 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 253 |
| Conread position: | 3-437 |
| Cow position: | chr6:45937089-45937514 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 3-473 |
| Cow position: | chr6:1536503-1536964 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 48 |
| Conread position: | 3-473 |
| Cow position: | chr6:7467859-7467391 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 3-473 |
| Cow position: | chr6:12663523-12663056 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 111 |
| Conread position: | 3-473 |
| Cow position: | chr6:14928251-14928718 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr6:20553449-20552982 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chr6:28103073-28102610 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 3-473 |
| Cow position: | chr6:34843920-34843454 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 3-473 |
| Cow position: | chr6:46947612-46948077 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 3-476 |
| Cow position: | chr6:365683-366152 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 108 |
| Conread position: | 5-473 |
| Cow position: | chr6:28064785-28065250 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 106 |
| Conread position: | 8-473 |
| Cow position: | chr6:53543681-53543224 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 9-476 |
| Cow position: | chr6:52899749-52900208 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 10-476 |
| Cow position: | chr6:14143832-14144283 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 103 |
| Conread position: | 38-456 |
| Cow position: | chr6:30317114-30316700 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 46 |
| Conread position: | 38-472 |
| Cow position: | chr6:9234339-9234769 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 80-458 |
| Cow position: | chr6:1498070-1498442 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 93-458 |
| Cow position: | chr6:8634424-8634061 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 126 |
| Conread position: | 112-473 |
| Cow position: | chr6:67553130-67553491 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 118 |
| Conread position: | 114-473 |
| Cow position: | chr6:705905-706257 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 116-466 |
| Cow position: | chr6:14290584-14290258 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 131-475 |
| Cow position: | chr6:6595339-6595686 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 157 |
| Conread position: | 157-453 |
| Cow position: | chr6:35600621-35600918 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 133 |
| Conread position: | 169-454 |
| Cow position: | chr6:41531535-41531830 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 127, 113 |
| Conread position: | 184-473 |
| Cow position: | chr6:14897154-14897440 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 62 |
| Conread position: | 210-468 |
| Cow position: | chr6:34237091-34236841 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 215-472 |
| Cow position: | chr6:6034796-6034539 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 72 |
| Conread position: | 233-473 |
| Cow position: | chr6:53672357-53672592 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 283-472 |
| Cow position: | chr6:49963885-49963694 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 283-473 |
| Cow position: | chr6:16644964-16645155 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 285-476 |
| Cow position: | chr6:25180112-25179922 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 61, 167 |
| Conread position: | 303-450 |
| Cow position: | chr6:52000828-52000973 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 308-472 |
| Cow position: | chr6:57228686-57228850 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 49 |
| Conread position: | 358-481 |
| Cow position: | chr6:62784914-62785038 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
Show alignments to all cow chromosomes.