Cow genome map
| Conread name: | Lng1-LNG010027C07 |
| Conread position: | 1-468 |
| Cow position: | chrX:2009078-2008607 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 292 |
| Conread position: | 1-473 |
| Cow position: | chrX:27978203-27977736 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 2-474 |
| Cow position: | chrX:26507883-26508327 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 3-472 |
| Cow position: | chrX:11146707-11146238 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 3-472 |
| Cow position: | chrX:22565055-22564588 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-472 |
| Cow position: | chrX:24321998-24321533 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chrX:9010963-9011427 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chrX:16360373-16359911 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 64 |
| Conread position: | 3-473 |
| Cow position: | chrX:21582071-21582539 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 106 |
| Conread position: | 3-473 |
| Cow position: | chrX:39713181-39713647 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 3-473 |
| Cow position: | chrX:42732510-42732968 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 4-467 |
| Cow position: | chrX:23021942-23022408 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 5-473 |
| Cow position: | chrX:31495369-31495833 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 62 |
| Conread position: | 9-475 |
| Cow position: | chrX:21389213-21389676 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 102 |
| Conread position: | 112-467 |
| Cow position: | chrX:43074621-43074973 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 95 |
| Conread position: | 114-473 |
| Cow position: | chrX:23985986-23986346 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 177 |
| Conread position: | 120-468 |
| Cow position: | chrX:20999530-20999178 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 172 |
| Conread position: | 123-475 |
| Cow position: | chrX:21414612-21414965 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 160 |
| Conread position: | 130-473 |
| Cow position: | chrX:21818696-21818362 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 84 |
| Conread position: | 130-475 |
| Cow position: | chrX:6656265-6655922 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 157 |
| Conread position: | 131-458 |
| Cow position: | chrX:10413217-10412894 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 134-473 |
| Cow position: | chrX:20953293-20953629 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 166-451 |
| Cow position: | chrX:38998636-38998913 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 50 |
| Conread position: | 168-473 |
| Cow position: | chrX:39556980-39556690 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 61 |
| Conread position: | 216-458 |
| Cow position: | chrX:16325686-16325448 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 218-446 |
| Cow position: | chrX:7177557-7177784 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 33 |
| Conread position: | 313-473 |
| Cow position: | chrX:12345831-12345992 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 328-443 |
| Cow position: | chrX:21750292-21750176 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 328-475 |
| Cow position: | chrX:29700991-29700845 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 332-473 |
| Cow position: | chrX:22887616-22887758 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 353-481 |
| Cow position: | chrX:18455794-18455666 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 99, 59 |
| Conread position: | 354-473 |
| Cow position: | chrX:12465017-12465134 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.